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The map label for this gene is recJ [H]

Identifier: 66044546

GI number: 66044546

Start: 1465993

End: 1467708

Strand: Direct

Name: recJ [H]

Synonym: Psyr_1298

Alternate gene names: 66044546

Gene position: 1465993-1467708 (Clockwise)

Preceding gene: 66044545

Following gene: 66044547

Centisome position: 24.06

GC content: 62.88

Gene sequence:

>1716_bases
ATGCGCATCGAACCTCGTCCATTGCCCGACACCTTGCCGTTCCTTGGCGACCTGCCGCCCTTGCTCACTCGTCTGTACGC
AGCACGAGGTGTGGCCTGCGAGGCCGAACTGGACAAAAGCCTGGCGCGGCTGATCCCCTATCAGCAACTCAAGGGGATCG
ATGCAGCGGTAGACCTGCTGGTCACTGCGCTGCGCGAGGGCCAGCGCATGTTGATCGTCGGCGATTTCGACGCCGATGGC
GCGACCGCCAGCACCGTGGGTGTTCTGGGACTGCGTCTGCTGGGCGCAGTGCATGTGGATTATCTGGTGCCCAACCGGTT
TGAATATGGCTACGGCCTTACGCCGGAAATCGTCGAAGTGGCATTGCAGCGCGAACCTCAGCTGTTGATCACCGTGGATA
ACGGCATTTCGAGCGTCGAGGGTGTAGCAGCGGCCAAGGCGGCCGGCTTGCAGGTACTGGTGACCGATCACCATTTGCCT
GGGCATGAGCTTCCGGCTGCAGACGCCATCGTCAACCCGAATCAGCCAGGCTGTACCTTTCCCAGCAAGTCGCTGGCCGG
TGTCGGGGTCATTTTCTACGTACTGATGGCCTTGCGGGCGCGTCTGCGCGAGACCGGCTGGTTCGAGAGCAATCAGCGTG
CCCAGCCCAATCTGGGCGAGCTTCTGGATTTGGTCGCGCTGGGCAGTGTGGCCGATGTGGTGCCGCTGGACGCCAACAAC
CGCATTCTGGTCCATCAGGGGCTGATGCGTATCCGTGCCGGGCGTGCCAGACCGGGGCTGCGCGCCATTCTCGAAGTGGC
ACGACGTGAACCTTCGCGCATCACCTCCACCGACCTGGGGTTCATTCTCGGGCCACGCCTGAACGCGGCAGGGCGCCTGG
ATGACATGAGCCTGGGCATCGAATGCCTGCTCTGCGACGACCCGACACTGGCGCGGGAAATGGCCGTGCAACTGGATGAG
TTGAACCAGGATCGCAAATCCATCGAGCAGGGCATGCAGCGTGAAGCACTCGCCCAGCTCAAGGACCTGCCGCTGGAGTC
GATGCCGTTTGGCCTCTGCCTGTTCGATGCCGAATGGCACCAGGGTGTCATCGGCATCCTCGCTTCGCGTCTCAAGGAGC
GTTACCACCGCCCGACCATCGCGTTCGCCAGCGCCGGGGAGGGCGTGCTCAAAGGCTCGGCCCGCTCGGTGCCAGGGTTT
CACATTCGCGACGCGCTGGACGCCGTGGCGGCCAGTCATCCGCACCTGATCAGCAAGTTCGGCGGCCACGCGATGGCGGC
AGGTCTTTCGCTGCCTGAAGAGAACTTCCCGGCATTTGCCGCAGCGTTCGACCAGGAGGTGCGTCGTCAGCTCGATGAGC
AGGACCTGACCGGGCGTTTGCTGTCCGACGGCTCGCTGGCCGTCGAGGAGTTTCATCTGGAGCTGGCCCGTGCACTGCGC
AATGCCGGTCCCTGGGGGCAGCACTTCCCGGAGCCTTTGTTCCACGGCGTGTTTCAGCTGGTCGAGCAACGGGTGGTGGG
CGAGCGTCATTTGAAGATGGTGCTCAAGACCGAATGCGGCAGCGTCAAGCTCGATGGCATTGCGTTCGGCGTCGACCGGG
ATATCTGGCCCAATCCGAATATCCGCTGGGTCGAGCTGGCCTACAAACTCGATCTCAACGAGTTTCGCGGTAACGAAACC
GTGCAATTGATGGTGGTGCATATCGCGCCACGCTGA

Upstream 100 bases:

>100_bases
GAAGTCCAGTTGCAATGGCTTGCGGGCGAGCGCGGCTGACAGCCGCCGGTTCCGTTCGAAAAACATTCATCGACACTGCA
CAGAGAATCAGCTGACCCGC

Downstream 100 bases:

>100_bases
CGATAGCAGGAACCCCTCTCGCTAACGGGGTGTCGACACTACACGGTCTGTCAAACCTGTTCTTTGAATGAACGGAACCT
GGACACCTGAATTTTCATTA

Product: RecJ exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLLVTALREGQRMLIVGDFDADG
ATASTVGVLGLRLLGAVHVDYLVPNRFEYGYGLTPEIVEVALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLP
GHELPAADAIVNPNQPGCTFPSKSLAGVGVIFYVLMALRARLRETGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
RILVHQGLMRIRAGRARPGLRAILEVARREPSRITSTDLGFILGPRLNAAGRLDDMSLGIECLLCDDPTLAREMAVQLDE
LNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWHQGVIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGF
HIRDALDAVAASHPHLISKFGGHAMAAGLSLPEENFPAFAAAFDQEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPNIRWVELAYKLDLNEFRGNET
VQLMVVHIAPR

Sequences:

>Translated_571_residues
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLLVTALREGQRMLIVGDFDADG
ATASTVGVLGLRLLGAVHVDYLVPNRFEYGYGLTPEIVEVALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLP
GHELPAADAIVNPNQPGCTFPSKSLAGVGVIFYVLMALRARLRETGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
RILVHQGLMRIRAGRARPGLRAILEVARREPSRITSTDLGFILGPRLNAAGRLDDMSLGIECLLCDDPTLAREMAVQLDE
LNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWHQGVIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGF
HIRDALDAVAASHPHLISKFGGHAMAAGLSLPEENFPAFAAAFDQEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPNIRWVELAYKLDLNEFRGNET
VQLMVVHIAPR
>Mature_571_residues
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLLVTALREGQRMLIVGDFDADG
ATASTVGVLGLRLLGAVHVDYLVPNRFEYGYGLTPEIVEVALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLP
GHELPAADAIVNPNQPGCTFPSKSLAGVGVIFYVLMALRARLRETGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
RILVHQGLMRIRAGRARPGLRAILEVARREPSRITSTDLGFILGPRLNAAGRLDDMSLGIECLLCDDPTLAREMAVQLDE
LNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWHQGVIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGF
HIRDALDAVAASHPHLISKFGGHAMAAGLSLPEENFPAFAAAFDQEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPNIRWVELAYKLDLNEFRGNET
VQLMVVHIAPR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=572, Percent_Identity=57.3426573426573, Blast_Score=664, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62429; Mature: 62429

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLL
CCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHCCHHHHHHHH
VTALREGQRMLIVGDFDADGATASTVGVLGLRLLGAVHVDYLVPNRFEYGYGLTPEIVEV
HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGHELPAADAIVNPNQPGCTF
HHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCC
PSKSLAGVGVIFYVLMALRARLRETGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCC
RILVHQGLMRIRAGRARPGLRAILEVARREPSRITSTDLGFILGPRLNAAGRLDDMSLGI
EEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCE
ECLLCDDPTLAREMAVQLDELNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWH
EEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHH
QGVIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGFHIRDALDAVAASHPHLISKF
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
GGHAMAAGLSLPEENFPAFAAAFDQEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHHCCCCHHHHHHHHHHHHHHH
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCC
IRWVELAYKLDLNEFRGNETVQLMVVHIAPR
EEEEEEEEEECHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure
MRIEPRPLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLARLIPYQQLKGIDAAVDLL
CCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHCCHHHHHHHH
VTALREGQRMLIVGDFDADGATASTVGVLGLRLLGAVHVDYLVPNRFEYGYGLTPEIVEV
HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGHELPAADAIVNPNQPGCTF
HHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCC
PSKSLAGVGVIFYVLMALRARLRETGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCC
RILVHQGLMRIRAGRARPGLRAILEVARREPSRITSTDLGFILGPRLNAAGRLDDMSLGI
EEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCE
ECLLCDDPTLAREMAVQLDELNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWH
EEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHH
QGVIGILASRLKERYHRPTIAFASAGEGVLKGSARSVPGFHIRDALDAVAASHPHLISKF
HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
GGHAMAAGLSLPEENFPAFAAAFDQEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHHCCCCHHHHHHHHHHHHHHH
NAGPWGQHFPEPLFHGVFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCC
IRWVELAYKLDLNEFRGNETVQLMVVHIAPR
EEEEEEEEEECHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]