Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is yaeQ [H]
Identifier: 66044545
GI number: 66044545
Start: 1465245
End: 1465931
Strand: Direct
Name: yaeQ [H]
Synonym: Psyr_1297
Alternate gene names: 66044545
Gene position: 1465245-1465931 (Clockwise)
Preceding gene: 66044543
Following gene: 66044546
Centisome position: 24.05
GC content: 58.08
Gene sequence:
>687_bases ATGTATCAGAAATTTGTTTCAAACTATCGATTTTTGTTCGTCCTGCAAATGGGGGGCAAACACACCCTTGCGCGAGCAAG TTCGTTCACAGGCCCGGCATCGGGTAGACTTGCCGTCTTCCCTCCAGACTCTAGAAGCCCGTTCATGGCCCAGCCGTCCA CGACCTACAAATTCGAACTCAATCTCACCGACCTTGATCGCGGCGTGTACGAGAGCGTCAAGCAGACCATTGCCCGCCAT CCTTCGGAAACCGAAGAGCGCATGACCGTGCGTCTGCTGGCCTATGCCTTCTGGTACAACGAACAGTTGTCGTTCGGTCG CGGCCTGTCTGATGTCGACGAACCCGCTCTGTGGGAAAAAAGCCTGGATGACCGCGTTCTGCACTGGATCGAAGTGGGGC AGCCCGACGCCGATCGACTGACCTGGTGTTCGCGCCGTACCGAACGCACCAGCCTGCTGGCCTATGGCAGCCTGCGCGTC TGGGAAGGCAAGGTCATCCCGGCGATCAAGAACCTGAAAAACGTCAATATCGCCGCCGTCCCGCAGGAAGTGCTGGAAGT GCTGGCCAAAGACATGCCGCGGGTCATCAAGTGGGATGTGATGATCAGTGAAGGGACGGTGTTCGTCACTGACGACCGCG GCCAGCATGAAGTCCAGTTGCAATGGCTTGCGGGCGAGCGCGGCTGA
Upstream 100 bases:
>100_bases GGGGTGGCAGCTCTTTGAATGGCGCTGCGCCAGTGGCGTCACATTCAGGTGCCCCGGTTGGGAGTCCGGGTGCTCGCTGC AGATCGTCTTTAGCACAGAT
Downstream 100 bases:
>100_bases CAGCCGCCGGTTCCGTTCGAAAAACATTCATCGACACTGCACAGAGAATCAGCTGACCCGCATGCGCATCGAACCTCGTC CATTGCCCGACACCTTGCCG
Product: YaeQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MYQKFVSNYRFLFVLQMGGKHTLARASSFTGPASGRLAVFPPDSRSPFMAQPSTTYKFELNLTDLDRGVYESVKQTIARH PSETEERMTVRLLAYAFWYNEQLSFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRV WEGKVIPAIKNLKNVNIAAVPQEVLEVLAKDMPRVIKWDVMISEGTVFVTDDRGQHEVQLQWLAGERG
Sequences:
>Translated_228_residues MYQKFVSNYRFLFVLQMGGKHTLARASSFTGPASGRLAVFPPDSRSPFMAQPSTTYKFELNLTDLDRGVYESVKQTIARH PSETEERMTVRLLAYAFWYNEQLSFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRV WEGKVIPAIKNLKNVNIAAVPQEVLEVLAKDMPRVIKWDVMISEGTVFVTDDRGQHEVQLQWLAGERG >Mature_228_residues MYQKFVSNYRFLFVLQMGGKHTLARASSFTGPASGRLAVFPPDSRSPFMAQPSTTYKFELNLTDLDRGVYESVKQTIARH PSETEERMTVRLLAYAFWYNEQLSFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRV WEGKVIPAIKNLKNVNIAAVPQEVLEVLAKDMPRVIKWDVMISEGTVFVTDDRGQHEVQLQWLAGERG
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=174, Percent_Identity=32.7586206896552, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 26085; Mature: 26085
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00147 ARGINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQKFVSNYRFLFVLQMGGKHTLARASSFTGPASGRLAVFPPDSRSPFMAQPSTTYKFEL CCHHHHCCCEEEEEEEECCCEEEHHCCCCCCCCCCEEEEECCCCCCCEEECCCCEEEEEE NLTDLDRGVYESVKQTIARHPSETEERMTVRLLAYAFWYNEQLSFGRGLSDVDEPALWEK EHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHH SLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAIKNLKNVNIAAV CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCEEEECCEECHHHHCCCCCCEEEC PQEVLEVLAKDMPRVIKWDVMISEGTVFVTDDRGQHEVQLQWLAGERG CHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCEEEEEEEECCCCC >Mature Secondary Structure MYQKFVSNYRFLFVLQMGGKHTLARASSFTGPASGRLAVFPPDSRSPFMAQPSTTYKFEL CCHHHHCCCEEEEEEEECCCEEEHHCCCCCCCCCCEEEEECCCCCCCEEECCCCEEEEEE NLTDLDRGVYESVKQTIARHPSETEERMTVRLLAYAFWYNEQLSFGRGLSDVDEPALWEK EHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHH SLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGSLRVWEGKVIPAIKNLKNVNIAAV CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCEEEECCEECHHHHCCCCCCEEEC PQEVLEVLAKDMPRVIKWDVMISEGTVFVTDDRGQHEVQLQWLAGERG CHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]