Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is yuxK [H]
Identifier: 66044119
GI number: 66044119
Start: 984156
End: 984587
Strand: Direct
Name: yuxK [H]
Synonym: Psyr_0864
Alternate gene names: 66044119
Gene position: 984156-984587 (Clockwise)
Preceding gene: 66044118
Following gene: 66044120
Centisome position: 16.15
GC content: 59.49
Gene sequence:
>432_bases GTGCCGAAAACCCCCGCCCCCTATCTGAAGCCCGATGAATGTGTCGTGCTGTTCGATGGCGTCTGCAAGCTGTGCAATGG CGTGGTGAAGTTTCTGATTCGCCATGACCCGCATCAACGTCTGCGCTTGGCCGCAGTGCAGTCGGAACAAGGTCAGGCAT TGCTGAAGTGGGCCGGGCTGCCACTGGACGATTTTCATACCATCGCGGTCATCGTCAACAATCGGGTGTTCGTGCGCTCG GATGCCTTTCTGCACATCATGGGGCTGTTGCCTGCGCCGTGGCCGCTGCTCAAGGTGCTGGGAATTTTTCCACGCTTTCT GCGGGACTGGGCCTACAACCGCATCGCGCTCAACCGATATCGCCTGTTCGGGCGCTATGATCACTGCCTGTTGCCATCAC CCGAGGACCGGCAGCGCTTCCTGGGTGACTGA
Upstream 100 bases:
>100_bases GGTAATGGCTTTAGCCTGAACGCCTCGCTGGTCCTTCGACTGGCGGGGCGTTCATGTTTCCGGGCGCGCCAAGGCTGTTT TTCCTGAACAGGTGAATACC
Downstream 100 bases:
>100_bases CGACCGGCGGTCATTTGTAAAGTCTGTCAGGCACGCACGGGTTGTGATCCACTCTGGCGGTCCGTAGAATTCGAGTCATC TGGCTTCACTTCCCATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPKTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGLPLDDFHTIAVIVNNRVFVRS DAFLHIMGLLPAPWPLLKVLGIFPRFLRDWAYNRIALNRYRLFGRYDHCLLPSPEDRQRFLGD
Sequences:
>Translated_143_residues MPKTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGLPLDDFHTIAVIVNNRVFVRS DAFLHIMGLLPAPWPLLKVLGIFPRFLRDWAYNRIALNRYRLFGRYDHCLLPSPEDRQRFLGD >Mature_142_residues PKTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGLPLDDFHTIAVIVNNRVFVRSD AFLHIMGLLPAPWPLLKVLGIFPRFLRDWAYNRIALNRYRLFGRYDHCLLPSPEDRQRFLGD
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16519; Mature: 16387
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGL CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEHHCCC PLDDFHTIAVIVNNRVFVRSDAFLHIMGLLPAPWPLLKVLGIFPRFLRDWAYNRIALNRY CCCCCEEEEEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLFGRYDHCLLPSPEDRQRFLGD HHHCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure PKTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGL CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEHHCCC PLDDFHTIAVIVNNRVFVRSDAFLHIMGLLPAPWPLLKVLGIFPRFLRDWAYNRIALNRY CCCCCEEEEEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLFGRYDHCLLPSPEDRQRFLGD HHHCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]