Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is phnA [H]
Identifier: 66044118
GI number: 66044118
Start: 983673
End: 984047
Strand: Direct
Name: phnA [H]
Synonym: Psyr_0863
Alternate gene names: 66044118
Gene position: 983673-984047 (Clockwise)
Preceding gene: 66044114
Following gene: 66044119
Centisome position: 16.14
GC content: 57.33
Gene sequence:
>375_bases ATGGTTTTACCCCTCCTCGATGCGAGAACCATTGTGAGCTTACCGTCCTGCCCGAAATGCAATTCCGAATACACCTACGA AGACGGCAGCCTGCTGATCTGCCCGGAATGCGCCCATGAATGGTCTGCCGACGCCGCTGGCACCGATGCGTCCGACGAGG TGAAAGTCATCAAGGACTCAACGGGCAACGTGCTGCAGGACGGCGATACCATCACCGTGATCAAGGACCTGAAAGTCAAA GGCTCCTCGCTGGTGGTCAAGGTCGGCACCAAGGTCAAGAACATCCGCCTGGTCGATGGCGACCATGACATCGACTGCAA GATCGACGGCATCGGCGCGATGAAGCTGAAGTCGGAGTTCGTCCGCAAGGTTTGA
Upstream 100 bases:
>100_bases TTTTTAGTTCAGGTCTTCGCTTCTGTCCAATGACTGAAGCAGGTTTATGACGACAGATCAGTCTCTTCCCACCTGAAACA GGAAAAGCCCCTTATAATGC
Downstream 100 bases:
>100_bases TTCTGCCGGGTAATGGCTTTAGCCTGAACGCCTCGCTGGTCCTTCGACTGGCGGGGCGTTCATGTTTCCGGGCGCGCCAA GGCTGTTTTTCCTGAACAGG
Product: PhnA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVLPLLDARTIVSLPSCPKCNSEYTYEDGSLLICPECAHEWSADAAGTDASDEVKVIKDSTGNVLQDGDTITVIKDLKVK GSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV
Sequences:
>Translated_124_residues MVLPLLDARTIVSLPSCPKCNSEYTYEDGSLLICPECAHEWSADAAGTDASDEVKVIKDSTGNVLQDGDTITVIKDLKVK GSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV >Mature_124_residues MVLPLLDARTIVSLPSCPKCNSEYTYEDGSLLICPECAHEWSADAAGTDASDEVKVIKDSTGNVLQDGDTITVIKDLKVK GSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=112, Percent_Identity=69.6428571428571, Blast_Score=166, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 13350; Mature: 13350
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPLLDARTIVSLPSCPKCNSEYTYEDGSLLICPECAHEWSADAAGTDASDEVKVIKDS CEECCCCCCEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECC TGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEF CCCEEECCCEEEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHH VRKV HHCC >Mature Secondary Structure MVLPLLDARTIVSLPSCPKCNSEYTYEDGSLLICPECAHEWSADAAGTDASDEVKVIKDS CEECCCCCCEEEECCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECC TGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEF CCCEEECCCEEEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHH VRKV HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]