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The map label for this gene is selD [H]

Identifier: 66043963

GI number: 66043963

Start: 800498

End: 801532

Strand: Direct

Name: selD [H]

Synonym: Psyr_0696

Alternate gene names: 66043963

Gene position: 800498-801532 (Clockwise)

Preceding gene: 66043958

Following gene: 66043964

Centisome position: 13.14

GC content: 63.19

Gene sequence:

>1035_bases
ATGAATGAGCCAATCCGCCTGACCCAGTACAGTCACGGAGCAGGGTGTGGCTGCAAGATTTCCCCCAACGTGCTGGACGT
GATCCTCGCTGGCAGCGGCGCTCAGAACCTTGACCCCAGACTTTGGGTTGGCAATGCCTCGCGTGATGACGCGGCGGTCT
ATGCGCTGGATGACGAGCGCGGCGTGGTCTCGACAACGGACTTCTTCATGCCCATCGTCGATGACCCGTTCGACTTCGGC
CGTATCGCCGCGACCAATGCCATCAGCGACATCTATGCGATGGGCGGCGACCCACTGATGGCCATCGCCATTCTCGGCTG
GCCGGTCAACATCCTGCCGCCAGAGGTCGCACGTGAAGTCATTCGCGGGGGGCGTGCCGTCTGCGACGCTGCCGGTATCC
CGCTGGCGGGCGGGCATTCCATCGATGCGCCGGAGCCGATCTTCGGTCTGGCGGTGACCGGCGTGGTGCAGAAAAAGCAC
ATGAAGCGCAACGACACTGCCCTGGCGGGGAGCACCTTGTACCTGACCAAGCCTCTGGGCATCGGCATCCTCACCACGGC
CGAGAAAAAATCGAAGTTGCGCGATGAGGACATCGGTCTGGCGCGTGACTGGATGTGTACCCTGAACAAGCCGGGCAGCC
GGTTCGGCAAGCTCGACGGGGTGCAGGCAATGACCGATGTCACCGGCTTCGGTCTGCTCGGGCATCTGGTTGAAATGGCT
GACGGCGCAGGTCTGACCGCACGTCTGGACTATGCTGCTGTACCGCGTCTGCCCGGCGTCGAGCATTACATTGCCGAGGG
CTGTGTGCCGGGCGGCACATTGCGCAATTTTGAAAGTTACGGCGACAGGATCGGCGCACTGAGCGATGCCCAGCGTGACC
TGTTGTGCGACCCGCAGACCAGCGGCGGCCTGCTGGTCGCGGTCAGCCATGAAGGTGAAGCCGAGTTTCTGATCGTGGCC
GCCGAACTGGGGCTGCTGCTCACCCCTATCGGCACCCTGCTCGAGCGACAGACCCACGCCGTCGAGGTGTTCTGA

Upstream 100 bases:

>100_bases
CACCGCCCGAATGCACGACCGGCGCACGACGCGGTTTGCGCTGATAAGGGAACAGCCCCTAGACTCCACAGCCTGTTTCC
CGGTAACCGAGAGTGTCGCG

Downstream 100 bases:

>100_bases
TGGCCGACAACAGCAGCGACTACCGCGCACTGTTTCTCAACGACGTGCCGATGATGGACGCTCGGGCTCCGGTGGAGTTT
TCCAAGGGGGCTTTCCCAGG

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNEPIRLTQYSHGAGCGCKISPNVLDVILAGSGAQNLDPRLWVGNASRDDAAVYALDDERGVVSTTDFFMPIVDDPFDFG
RIAATNAISDIYAMGGDPLMAIAILGWPVNILPPEVAREVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKH
MKRNDTALAGSTLYLTKPLGIGILTTAEKKSKLRDEDIGLARDWMCTLNKPGSRFGKLDGVQAMTDVTGFGLLGHLVEMA
DGAGLTARLDYAAVPRLPGVEHYIAEGCVPGGTLRNFESYGDRIGALSDAQRDLLCDPQTSGGLLVAVSHEGEAEFLIVA
AELGLLLTPIGTLLERQTHAVEVF

Sequences:

>Translated_344_residues
MNEPIRLTQYSHGAGCGCKISPNVLDVILAGSGAQNLDPRLWVGNASRDDAAVYALDDERGVVSTTDFFMPIVDDPFDFG
RIAATNAISDIYAMGGDPLMAIAILGWPVNILPPEVAREVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKH
MKRNDTALAGSTLYLTKPLGIGILTTAEKKSKLRDEDIGLARDWMCTLNKPGSRFGKLDGVQAMTDVTGFGLLGHLVEMA
DGAGLTARLDYAAVPRLPGVEHYIAEGCVPGGTLRNFESYGDRIGALSDAQRDLLCDPQTSGGLLVAVSHEGEAEFLIVA
AELGLLLTPIGTLLERQTHAVEVF
>Mature_344_residues
MNEPIRLTQYSHGAGCGCKISPNVLDVILAGSGAQNLDPRLWVGNASRDDAAVYALDDERGVVSTTDFFMPIVDDPFDFG
RIAATNAISDIYAMGGDPLMAIAILGWPVNILPPEVAREVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKH
MKRNDTALAGSTLYLTKPLGIGILTTAEKKSKLRDEDIGLARDWMCTLNKPGSRFGKLDGVQAMTDVTGFGLLGHLVEMA
DGAGLTARLDYAAVPRLPGVEHYIAEGCVPGGTLRNFESYGDRIGALSDAQRDLLCDPQTSGGLLVAVSHEGEAEFLIVA
AELGLLLTPIGTLLERQTHAVEVF

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=345, Percent_Identity=28.4057971014493, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI15011844, Length=358, Percent_Identity=28.7709497206704, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788062, Length=330, Percent_Identity=67.5757575757576, Blast_Score=451, Evalue=1e-128,
Organism=Caenorhabditis elegans, GI17543426, Length=354, Percent_Identity=28.2485875706215, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24653602, Length=346, Percent_Identity=27.4566473988439, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24653604, Length=346, Percent_Identity=27.4566473988439, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI28574118, Length=302, Percent_Identity=29.1390728476821, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28574119, Length=285, Percent_Identity=29.1228070175439, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36317; Mature: 36317

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPIRLTQYSHGAGCGCKISPNVLDVILAGSGAQNLDPRLWVGNASRDDAAVYALDDER
CCCCEEEEEECCCCCCCCEECCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCC
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNILPPEVAREV
CEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH
IRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKHMKRNDTALAGSTLYLTKPLG
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCC
IGILTTAEKKSKLRDEDIGLARDWMCTLNKPGSRFGKLDGVQAMTDVTGFGLLGHLVEMA
CEEEEECHHHHHCCCCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGAGLTARLDYAAVPRLPGVEHYIAEGCVPGGTLRNFESYGDRIGALSDAQRDLLCDPQT
CCCCCEEEECHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SGGLLVAVSHEGEAEFLIVAAELGLLLTPIGTLLERQTHAVEVF
CCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MNEPIRLTQYSHGAGCGCKISPNVLDVILAGSGAQNLDPRLWVGNASRDDAAVYALDDER
CCCCEEEEEECCCCCCCCEECCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCC
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNILPPEVAREV
CEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHH
IRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGVVQKKHMKRNDTALAGSTLYLTKPLG
HHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCC
IGILTTAEKKSKLRDEDIGLARDWMCTLNKPGSRFGKLDGVQAMTDVTGFGLLGHLVEMA
CEEEEECHHHHHCCCCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGAGLTARLDYAAVPRLPGVEHYIAEGCVPGGTLRNFESYGDRIGALSDAQRDLLCDPQT
CCCCCEEEECHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SGGLLVAVSHEGEAEFLIVAAELGLLLTPIGTLLERQTHAVEVF
CCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]