Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043903
Identifier: 66043903
GI number: 66043903
Start: 726272
End: 726634
Strand: Direct
Name: 66043903
Synonym: Psyr_0636
Alternate gene names: NA
Gene position: 726272-726634 (Clockwise)
Preceding gene: 66043899
Following gene: 66043904
Centisome position: 11.92
GC content: 59.5
Gene sequence:
>363_bases ATGCTGTTAAGGGGTTTGACATGGCTGGTGCTGTTCCAACTGCTGGGGACCGCGCTCAACCACCTGTTTCTGTCGATTTT GCCAGGGCCGATCATCGGCCTTGTGCTGCTTATGGCGTATTTGATGTGGCGCGGTGAAGTCAGCGAGCCGATCAGCATGG CGGCCAGCAGTCTGCTGCGCTATCTGCCGTTGCTGCTGGTGCCGCCTGCGGTCGGGGTGATGGTGTACGCGTCGGCCATT GCCGAAGACTTCTGGGCGATCTTTGGCACCCTGACCCTGTCGCTGATGATTTCCGTGGTCTTTGTCGGCTGGCTGATGCA GTCATTGATCAAGCGTCAGGCCCAGCGCCGGGAGTTGCCATGA
Upstream 100 bases:
>100_bases AGCAACTGCAGCAATGCGAATACCCACTCATGACCTCTGGCGCAGCGTGTTTATAATGACGCCGATCGTTCGCCGGGTTC GTTTATCTGCTGGAGTCTTC
Downstream 100 bases:
>100_bases GTCTTGACTGGCACGGTGCATGGCTGTCGGTGATTCATCACCCGCTTTTCGGCATCGCGATCACCCTGAGTGCCTACCAA TTGGCGATGGCCGCCTATGA
Product: LrgA
Products: NA
Alternate protein names: Integral Membrane Protein LrgA Family
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MLLRGLTWLVLFQLLGTALNHLFLSILPGPIIGLVLLMAYLMWRGEVSEPISMAASSLLRYLPLLLVPPAVGVMVYASAI AEDFWAIFGTLTLSLMISVVFVGWLMQSLIKRQAQRRELP
Sequences:
>Translated_120_residues MLLRGLTWLVLFQLLGTALNHLFLSILPGPIIGLVLLMAYLMWRGEVSEPISMAASSLLRYLPLLLVPPAVGVMVYASAI AEDFWAIFGTLTLSLMISVVFVGWLMQSLIKRQAQRRELP >Mature_120_residues MLLRGLTWLVLFQLLGTALNHLFLSILPGPIIGLVLLMAYLMWRGEVSEPISMAASSLLRYLPLLLVPPAVGVMVYASAI AEDFWAIFGTLTLSLMISVVFVGWLMQSLIKRQAQRRELP
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13355; Mature: 13355
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRGLTWLVLFQLLGTALNHLFLSILPGPIIGLVLLMAYLMWRGEVSEPISMAASSLLR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLPLLLVPPAVGVMVYASAIAEDFWAIFGTLTLSLMISVVFVGWLMQSLIKRQAQRRELP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLRGLTWLVLFQLLGTALNHLFLSILPGPIIGLVLLMAYLMWRGEVSEPISMAASSLLR CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YLPLLLVPPAVGVMVYASAIAEDFWAIFGTLTLSLMISVVFVGWLMQSLIKRQAQRRELP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA