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The map label for this gene is yohK [H]

Identifier: 66043904

GI number: 66043904

Start: 726631

End: 727347

Strand: Direct

Name: yohK [H]

Synonym: Psyr_0637

Alternate gene names: 66043904

Gene position: 726631-727347 (Clockwise)

Preceding gene: 66043903

Following gene: 66043905

Centisome position: 11.92

GC content: 59.69

Gene sequence:

>717_bases
ATGAGTCTTGACTGGCACGGTGCATGGCTGTCGGTGATTCATCACCCGCTTTTCGGCATCGCGATCACCCTGAGTGCCTA
CCAATTGGCGATGGCCGCCTATGAAAGAACCCGCTGGCTTTTTCTGCAGCCTGTGCTGGTCTCGATGGTGGTGGTGATCG
GGATCGTGCTGTTCTGCGACCTTGAATACACCGAGTACCGCAAAAGCACCGAGATTCTGGGCACGCTGCTGGGGCCTGCA
ACCGTTGCGCTGGCGGTCCCGCTCTATTTGAATATGCGACGGATCCGCCAGTTGTTCTGGCCGGTCTTGACTACGCTGGT
AATCGGCGGGGTGTTTGCCACCGGTTTGTGCGTGGGGTTCGGGGTGCTGTTCGGTGCCGACCACATGATTCTGATGACCA
TGGCGCCCAAATCAGTGACATCGCCCATCGCCATGCTGGTCGCCGAGCAGATCGGCGGGGTTGCCGCCCTGGCGGCTGTT
TTTGTGTTGATTACTGGCGTATTCGGTGCCATTTTCGGCCCCGGTCTGCTGTCACTGATCGGGGTGGACAATCCTGCTGC
CCGAGGCATGGCGCTGGGGCTTACCGCGCATGCGGTAGGCACATCCGTGGCATTGCAGGAGGGGGAAGAAACGGGGGCTT
TTGCTGCGTTGGCAATGAGTCTGATGGGCGTTGCGACGGCGTTGTTCCTGCCGCTGGCAATGTCGCTGGCCATTTAA

Upstream 100 bases:

>100_bases
TCTTTGGCACCCTGACCCTGTCGCTGATGATTTCCGTGGTCTTTGTCGGCTGGCTGATGCAGTCATTGATCAAGCGTCAG
GCCCAGCGCCGGGAGTTGCC

Downstream 100 bases:

>100_bases
AAGGAGGCTTTTCTATGACGCTGCCATTGTTTCCGCTGAATGCTGTGCTGTTTCCAGGGTGCGTGCTTGATCTGCAGCTG
TTTGAAGCCCGTTACCTGGA

Product: LrgB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSLDWHGAWLSVIHHPLFGIAITLSAYQLAMAAYERTRWLFLQPVLVSMVVVIGIVLFCDLEYTEYRKSTEILGTLLGPA
TVALAVPLYLNMRRIRQLFWPVLTTLVIGGVFATGLCVGFGVLFGADHMILMTMAPKSVTSPIAMLVAEQIGGVAALAAV
FVLITGVFGAIFGPGLLSLIGVDNPAARGMALGLTAHAVGTSVALQEGEETGAFAALAMSLMGVATALFLPLAMSLAI

Sequences:

>Translated_238_residues
MSLDWHGAWLSVIHHPLFGIAITLSAYQLAMAAYERTRWLFLQPVLVSMVVVIGIVLFCDLEYTEYRKSTEILGTLLGPA
TVALAVPLYLNMRRIRQLFWPVLTTLVIGGVFATGLCVGFGVLFGADHMILMTMAPKSVTSPIAMLVAEQIGGVAALAAV
FVLITGVFGAIFGPGLLSLIGVDNPAARGMALGLTAHAVGTSVALQEGEETGAFAALAMSLMGVATALFLPLAMSLAI
>Mature_237_residues
SLDWHGAWLSVIHHPLFGIAITLSAYQLAMAAYERTRWLFLQPVLVSMVVVIGIVLFCDLEYTEYRKSTEILGTLLGPAT
VALAVPLYLNMRRIRQLFWPVLTTLVIGGVFATGLCVGFGVLFGADHMILMTMAPKSVTSPIAMLVAEQIGGVAALAAVF
VLITGVFGAIFGPGLLSLIGVDNPAARGMALGLTAHAVGTSVALQEGEETGAFAALAMSLMGVATALFLPLAMSLAI

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=196, Percent_Identity=40.8163265306122, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25048; Mature: 24917

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDWHGAWLSVIHHPLFGIAITLSAYQLAMAAYERTRWLFLQPVLVSMVVVIGIVLFCD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEYTEYRKSTEILGTLLGPATVALAVPLYLNMRRIRQLFWPVLTTLVIGGVFATGLCVGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLFGADHMILMTMAPKSVTSPIAMLVAEQIGGVAALAAVFVLITGVFGAIFGPGLLSLI
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVDNPAARGMALGLTAHAVGTSVALQEGEETGAFAALAMSLMGVATALFLPLAMSLAI
CCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLDWHGAWLSVIHHPLFGIAITLSAYQLAMAAYERTRWLFLQPVLVSMVVVIGIVLFCD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEYTEYRKSTEILGTLLGPATVALAVPLYLNMRRIRQLFWPVLTTLVIGGVFATGLCVGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLFGADHMILMTMAPKSVTSPIAMLVAEQIGGVAALAAVFVLITGVFGAIFGPGLLSLI
HHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVDNPAARGMALGLTAHAVGTSVALQEGEETGAFAALAMSLMGVATALFLPLAMSLAI
CCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]