Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043899
Identifier: 66043899
GI number: 66043899
Start: 722518
End: 722802
Strand: Direct
Name: 66043899
Synonym: Psyr_0632
Alternate gene names: NA
Gene position: 722518-722802 (Clockwise)
Preceding gene: 66043898
Following gene: 66043903
Centisome position: 11.86
GC content: 64.56
Gene sequence:
>285_bases ATGAATAAGCTGCTGCTGGTAGCGCTTGCGCTGACGCTGACCGGCTGCGCAACGGCACGCACGCTCAATGCGGCCAAACC GGGCGCGCCGGTGGTGTATGCAGGTACGCGCTTGAATATGTATGCGCTGCAGGGTGGTTGCTGTGCCGCCGACCGATTCG GTGCACAAGCTCCCAGCTACCCTGGCCTTGACCTGCCGGGCAGTGCGCTGCTCGACACCCTGCTCCTGCCACTGTCATTG CTGACGGCCGCGGGACTGGGGGTTCAGGCTACGGGCGGGCTTTAA
Upstream 100 bases:
>100_bases ATCGACGACCTGGTGGACTTTGTCGTCGCGCGGATCCTCAATCTGCTGAACATCCCTCAGGACATGTTGCCGCGCTGGGG CGAGCACCATATTGGCGGCG
Downstream 100 bases:
>100_bases TGTGACGCAGATCATTCCCATGCGGAGCTGATCGTTATATACAAATCTGCTTTTGATTCTGGCCGCAGGCCGTAGGAGCA AGCCGGGCGACGCATCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNKLLLVALALTLTGCATARTLNAAKPGAPVVYAGTRLNMYALQGGCCAADRFGAQAPSYPGLDLPGSALLDTLLLPLSL LTAAGLGVQATGGL
Sequences:
>Translated_94_residues MNKLLLVALALTLTGCATARTLNAAKPGAPVVYAGTRLNMYALQGGCCAADRFGAQAPSYPGLDLPGSALLDTLLLPLSL LTAAGLGVQATGGL >Mature_94_residues MNKLLLVALALTLTGCATARTLNAAKPGAPVVYAGTRLNMYALQGGCCAADRFGAQAPSYPGLDLPGSALLDTLLLPLSL LTAAGLGVQATGGL
Specific function: Unknown
COG id: COG5645
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9342; Mature: 9342
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLLVALALTLTGCATARTLNAAKPGAPVVYAGTRLNMYALQGGCCAADRFGAQAPSY CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCC PGLDLPGSALLDTLLLPLSLLTAAGLGVQATGGL CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure MNKLLLVALALTLTGCATARTLNAAKPGAPVVYAGTRLNMYALQGGCCAADRFGAQAPSY CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCC PGLDLPGSALLDTLLLPLSLLTAAGLGVQATGGL CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA