Definition Corynebacterium glutamicum ATCC 13032, complete genome.
Accession NC_006958
Length 3,282,708

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The map label for this gene is dapD2

Identifier: 62389998

GI number: 62389998

Start: 1156194

End: 1157144

Strand: Reverse

Name: dapD2

Synonym: cg1259

Alternate gene names: NA

Gene position: 1157144-1156194 (Counterclockwise)

Preceding gene: 62390006

Following gene: 62389997

Centisome position: 35.25

GC content: 56.26

Gene sequence:

>951_bases
ATGAGTGAAAACATTCGCGGAGCCCAAGCAGTTGGAATCGCAAATATCGCCATGGACGGGACCATCCTGGACACGTGGTA
CCCAGAACCCCAAATTTTCAACCCGGATCAGTGGGCTGAACGCTACCCATTGGAAGTGGGCACCACACGCCTCGGAGCAA
ACGAACTCACCCCACGGATGCTGCAGTTGGTAAAACTGGACCAAGATCGCCTCGTCGAACAGGTAGCAGTCCGCACCGTT
ATCCCCGATCTGTCTCAACCTCCAGTAGACGCGCACGATGTTTACCTGCGCCTCCACCTGCTTTCCCACCGCCTGGTCCG
CCCCCACGAAATGCACATGCAAAACACCTTGGAGCTGCTGTCCGACGTGGTGTGGACAAACAAGGGCCCTTGCCTTCCTG
AAAACTTTGAGTGGGTGCGTGGTGCTCTGCGGTCCCGCGGACTCATCCACGTCTACTGTGTGGACCGTCTTCCCCGCATG
GTCGACTATGTGGTTCCCCCTGGAGTCCGCATCTCCGAAGCAGAACGCGTGCGCCTAGGTGCATACCTTGCTCCGGGTAC
CTCTGTGCTGCGTGAAGGTTTCGTGTCTTTCAACTCCGGCACCTTGGGTGCCGCAAAGGTGGAAGGCCGCCTGAGTTCCG
GTGTGGTCATCGGTGAAGGTTCCGAGATTGGACTGTCTTCTACTATTCAGTCCCCGAGAGATGAACAGCGCCGCCGTTTG
CCGTTGAGCATCGGCCAAAACTGCAACTTTGGTGTCAGCTCCGGAATCATCGGAGTCAGTCTGGGAGACAATTGCGACAT
CGGAAATAACATTGTCTTGGATGGAGATACCCCCATTTGGTTCGCAGCCGATGAGGAGTTACGCACTATCGACTCCATCG
AAGGCCAAGCAAATTGGTCAATCAAGCGTGAATCCGGCTTCCATGAGCCAGTTGCCCGCCTCAAAGCTTGA

Upstream 100 bases:

>100_bases
TTGGGTCGCCGAGGAGATCTAATCCTGGTTTGAGTTCAGAGTTCACAGGTTTAAGCCTACAAACCTTAGTTAAAACATGA
TGGAAGCGGTCGATTAAAAA

Downstream 100 bases:

>100_bases
CCCATTTTCATAACCAGTGCCATGTGGGTTTACGGTTGATACATGGCTAAATCTAATGAAGGGCTGGGAACCGGACTTCG
GACCCGCCACCTCACAATGA

Product: tetrahydrodipicolinate N-succinyltransferase

Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate

Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTV
IPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRM
VDYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL
PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA

Sequences:

>Translated_316_residues
MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTV
IPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRM
VDYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL
PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA
>Mature_315_residues
SENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTVI
PDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMV
DYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRLP
LSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA

Specific function: Unknown

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.117

Molecular weight: Translated: 34949; Mature: 34818

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRM
CCCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCHHCCHHH
LQLVKLDQDRLVEQVAVRTVIPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELL
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMVDYVVPPGVRISEAERVRLG
HHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCEECCCCEEEEE
AYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL
EEECCCHHHHHHHHHCCCCCCCCHHEECCCCCCCEEEECCCCCCCHHHHCCCHHHHHHCC
PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWS
CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCEE
IKRESGFHEPVARLKA
EECCCCCHHHHHHHCC
>Mature Secondary Structure 
SENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRM
CCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCHHCCHHH
LQLVKLDQDRLVEQVAVRTVIPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELL
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMVDYVVPPGVRISEAERVRLG
HHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCEECCCCEEEEE
AYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL
EEECCCHHHHHHHHHCCCCCCCCHHEECCCCCCCEEEECCCCCCCHHHHCCCHHHHHHCC
PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWS
CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCEE
IKRESGFHEPVARLKA
EECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O

Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA