| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is dapD2
Identifier: 62389998
GI number: 62389998
Start: 1156194
End: 1157144
Strand: Reverse
Name: dapD2
Synonym: cg1259
Alternate gene names: NA
Gene position: 1157144-1156194 (Counterclockwise)
Preceding gene: 62390006
Following gene: 62389997
Centisome position: 35.25
GC content: 56.26
Gene sequence:
>951_bases ATGAGTGAAAACATTCGCGGAGCCCAAGCAGTTGGAATCGCAAATATCGCCATGGACGGGACCATCCTGGACACGTGGTA CCCAGAACCCCAAATTTTCAACCCGGATCAGTGGGCTGAACGCTACCCATTGGAAGTGGGCACCACACGCCTCGGAGCAA ACGAACTCACCCCACGGATGCTGCAGTTGGTAAAACTGGACCAAGATCGCCTCGTCGAACAGGTAGCAGTCCGCACCGTT ATCCCCGATCTGTCTCAACCTCCAGTAGACGCGCACGATGTTTACCTGCGCCTCCACCTGCTTTCCCACCGCCTGGTCCG CCCCCACGAAATGCACATGCAAAACACCTTGGAGCTGCTGTCCGACGTGGTGTGGACAAACAAGGGCCCTTGCCTTCCTG AAAACTTTGAGTGGGTGCGTGGTGCTCTGCGGTCCCGCGGACTCATCCACGTCTACTGTGTGGACCGTCTTCCCCGCATG GTCGACTATGTGGTTCCCCCTGGAGTCCGCATCTCCGAAGCAGAACGCGTGCGCCTAGGTGCATACCTTGCTCCGGGTAC CTCTGTGCTGCGTGAAGGTTTCGTGTCTTTCAACTCCGGCACCTTGGGTGCCGCAAAGGTGGAAGGCCGCCTGAGTTCCG GTGTGGTCATCGGTGAAGGTTCCGAGATTGGACTGTCTTCTACTATTCAGTCCCCGAGAGATGAACAGCGCCGCCGTTTG CCGTTGAGCATCGGCCAAAACTGCAACTTTGGTGTCAGCTCCGGAATCATCGGAGTCAGTCTGGGAGACAATTGCGACAT CGGAAATAACATTGTCTTGGATGGAGATACCCCCATTTGGTTCGCAGCCGATGAGGAGTTACGCACTATCGACTCCATCG AAGGCCAAGCAAATTGGTCAATCAAGCGTGAATCCGGCTTCCATGAGCCAGTTGCCCGCCTCAAAGCTTGA
Upstream 100 bases:
>100_bases TTGGGTCGCCGAGGAGATCTAATCCTGGTTTGAGTTCAGAGTTCACAGGTTTAAGCCTACAAACCTTAGTTAAAACATGA TGGAAGCGGTCGATTAAAAA
Downstream 100 bases:
>100_bases CCCATTTTCATAACCAGTGCCATGTGGGTTTACGGTTGATACATGGCTAAATCTAATGAAGGGCTGGGAACCGGACTTCG GACCCGCCACCTCACAATGA
Product: tetrahydrodipicolinate N-succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTV IPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRM VDYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA
Sequences:
>Translated_316_residues MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTV IPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRM VDYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA >Mature_315_residues SENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRMLQLVKLDQDRLVEQVAVRTVI PDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELLSDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMV DYVVPPGVRISEAERVRLGAYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRLP LSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWSIKRESGFHEPVARLKA
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 34949; Mature: 34818
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRM CCCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCHHCCHHH LQLVKLDQDRLVEQVAVRTVIPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELL HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMVDYVVPPGVRISEAERVRLG HHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCEECCCCEEEEE AYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL EEECCCHHHHHHHHHCCCCCCCCHHEECCCCCCCEEEECCCCCCCHHHHCCCHHHHHHCC PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWS CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCEE IKRESGFHEPVARLKA EECCCCCHHHHHHHCC >Mature Secondary Structure SENIRGAQAVGIANIAMDGTILDTWYPEPQIFNPDQWAERYPLEVGTTRLGANELTPRM CCCCCCCHHEEEEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCHHCCHHH LQLVKLDQDRLVEQVAVRTVIPDLSQPPVDAHDVYLRLHLLSHRLVRPHEMHMQNTLELL HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SDVVWTNKGPCLPENFEWVRGALRSRGLIHVYCVDRLPRMVDYVVPPGVRISEAERVRLG HHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCEECCCCEEEEE AYLAPGTSVLREGFVSFNSGTLGAAKVEGRLSSGVVIGEGSEIGLSSTIQSPRDEQRRRL EEECCCHHHHHHHHHCCCCCCCCHHEECCCCCCCEEEECCCCCCCHHHHCCCHHHHHHCC PLSIGQNCNFGVSSGIIGVSLGDNCDIGNNIVLDGDTPIWFAADEELRTIDSIEGQANWS CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCEE IKRESGFHEPVARLKA EECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA