| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is scrB [H]
Identifier: 62390006
GI number: 62390006
Start: 1162203
End: 1163699
Strand: Reverse
Name: scrB [H]
Synonym: cg1267
Alternate gene names: 62390006
Gene position: 1163699-1162203 (Counterclockwise)
Preceding gene: 62390007
Following gene: 62389998
Centisome position: 35.45
GC content: 52.57
Gene sequence:
>1497_bases ATGACGAACGTTTCCGGGTATCACCGACCAGAGCTGCACATCACCGCTGAAAGTGGTGTTTTGTTTGCACCTGCAGGCGT TCTGTTGGATGACGACACGTGGCATTTCTTCCACCAGTACCGTCCCTCACCAGATCACGGCCCCAGGTGGGCGCACCAAT TCGCAGAGCGCACTCCATTTGTGTGGGATATCTGCGATGACGTGCTAGCCCCTGAAGGCGATGAAACCCAGGTTCGCGCT GGCTCAGTGGTGTCCAACAACGGTGGCGTTGATCTGTACTTCACCTCGGTTGTTGGCCCCACTTCCACTATCCAGTTGGC ACACATCAACAACATCCGTGGCACCACCGAACTGATCAATGAGGACGAGCTGGGGCTCGATCCAGATGTCTCCCGAATCG GCGAAGTGGTTGGCAACACTGATGGTTATGTAAAGTTCCGCTCACCGTGCGTTATCCCAGGTTGGGAAGACCAAGGAAAC CGCGATGAAGGCCACTCAGGATGGTTGATGCTCGCAGTTACTGGCCCAGTTGAAGCCCCAACAGTAGTGGTCCTCGACTC GCCAGATGGAAGAGAATGGTCCATTACAGGTCCCCTGTCTCTCAACGGCCTCTCTGGATTAGAGTCAGACGAAGTTCTAG TTGCTCCTCGCATGATTCGTCTGCGCGATGAAGTGGATCATGAAATCTACGATGTCCTCATTGTCACCATTGAACAAGAC GGGATTGACATTTCGGGATACCTGGTAGGCCAGCTCAACGGCTCAGAATTCGATGTGAAGACTCCATTTACCCGCATCGA TTTTGGCCATGATTTCTCTCGCCCCCGCAACACCAACTACGCCGAAACCACCATCGGCTACGACTTCGCCCACATCTTTG GTCTCATGAATGGCGTAGGTCGTTTGGACTCCCCCACTGAGCATCTCAGTTGGAAGGAAGAAGGCTGGGCAAACGCTATT TCTTTCCCACGTATTGTCACGCTCCAGGACGGTACGGTCTTCCAGACCCCTCCAGAAGGATTGCTTGATGCCATTCATGA ATCCGAGGCAGCGGCAGGTTGGACCGGACTGTGCGAAATCCCATCAAACAGCGCAGTTGAAGTGGCGTTGAAGGACCAAG AAGGTGAAATCGCTGCAACAATCACTCACCGCCACAATCAGCTAGTCGTTGATCGGTCCATGAACCCCAACCACGCGGGT GATCCACACGCGATTGCACCATTGACTGATGATGAAACAGATTCACTGTTCATTGTCGTTGACGGCTCTACAGTAGAAGT TTTTGCTGATGGCGGTTATGTATCAATGGCAAGCCGTGTGTATTTCAACAACGGACCATTCAGCGAATTTGAGGTCACCA CCACCGGTGACGCAAGCATTATTCGCCAGGAAAGTCACTTCCCTGTTGATTTCAGTTCGGTGTCCCTAGATATAGATGAT CTCACTGCGCTCATGCAGTTCGATGAAAACGAACCGCATGAAGGCCCAGTGAGATAA
Upstream 100 bases:
>100_bases TAACCTGCCTTCACCTGGGATTATCCACCCATGTGTGATGAAATCGCTACCCTGAATCAAAGACACTGGCGTAATTGAGT GAAGGCAGGACAATAAAGAG
Downstream 100 bases:
>100_bases GAGTTAGATGCGTTCCAGCCTGGTGATCTTGGCCCGGGCTGTAACCTTCATTTGTTCTGGTAGAGCGGCGATGCGTTCCG CCAAAGCCTCAGGCTTAATG
Product: Beta-fructosidase (levanase/invertase)
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTNVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRA GSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVSRIGEVVGNTDGYVKFRSPCVIPGWEDQGN RDEGHSGWLMLAVTGPVEAPTVVVLDSPDGREWSITGPLSLNGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQD GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIGYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANAI SFPRIVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSAVEVALKDQEGEIAATITHRHNQLVVDRSMNPNHAG DPHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD LTALMQFDENEPHEGPVR
Sequences:
>Translated_498_residues MTNVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRA GSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVSRIGEVVGNTDGYVKFRSPCVIPGWEDQGN RDEGHSGWLMLAVTGPVEAPTVVVLDSPDGREWSITGPLSLNGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQD GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIGYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANAI SFPRIVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSAVEVALKDQEGEIAATITHRHNQLVVDRSMNPNHAG DPHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD LTALMQFDENEPHEGPVR >Mature_497_residues TNVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRAG SVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVSRIGEVVGNTDGYVKFRSPCVIPGWEDQGNR DEGHSGWLMLAVTGPVEAPTVVVLDSPDGREWSITGPLSLNGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQDG IDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIGYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANAIS FPRIVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSAVEVALKDQEGEIAATITHRHNQLVVDRSMNPNHAGD PHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDDL TALMQFDENEPHEGPVR
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 54597; Mature: 54465
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPF CCCCCCCCCCEEEEEECCCEEEECCCEEEECCCEEEHEECCCCCCCCCHHHHHHHHCCCE VWDICDDVLAPEGDETQVRAGSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELIN EEEHHHHHHCCCCCCCEEEECCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHCC EDELGLDPDVSRIGEVVGNTDGYVKFRSPCVIPGWEDQGNRDEGHSGWLMLAVTGPVEAP CCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCC TVVVLDSPDGREWSITGPLSLNGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQD EEEEEECCCCCEEEEECCEEECCCCCCCCCCEEECCHHEEHHHHHCCCEEEEEEEEEECC GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIGYDFAHIFGLMNGVG CCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC RLDSPTEHLSWKEEGWANAISFPRIVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEI CCCCCHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCCCEEEEC PSNSAVEVALKDQEGEIAATITHRHNQLVVDRSMNPNHAGDPHAIAPLTDDETDSLFIVV CCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEE DGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD ECCEEEEEECCCEEEEEEEEEECCCCCCEEEEEECCCHHEEEECCCCCEECCEEEEEHHH LTALMQFDENEPHEGPVR HHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPF CCCCCCCCCEEEEEECCCEEEECCCEEEECCCEEEHEECCCCCCCCCHHHHHHHHCCCE VWDICDDVLAPEGDETQVRAGSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELIN EEEHHHHHHCCCCCCCEEEECCEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHCC EDELGLDPDVSRIGEVVGNTDGYVKFRSPCVIPGWEDQGNRDEGHSGWLMLAVTGPVEAP CCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCC TVVVLDSPDGREWSITGPLSLNGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQD EEEEEECCCCCEEEEECCEEECCCCCCCCCCEEECCHHEEHHHHHCCCEEEEEEEEEECC GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIGYDFAHIFGLMNGVG CCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC RLDSPTEHLSWKEEGWANAISFPRIVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEI CCCCCHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCCCEEEEC PSNSAVEVALKDQEGEIAATITHRHNQLVVDRSMNPNHAGDPHAIAPLTDDETDSLFIVV CCCCEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEE DGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD ECCEEEEEECCCEEEEEEEEEECCCCCCEEEEEECCCHHEEEECCCCCEECCEEEEEHHH LTALMQFDENEPHEGPVR HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA