| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is benK3 [H]
Identifier: 62389965
GI number: 62389965
Start: 1124999
End: 1126294
Strand: Reverse
Name: benK3 [H]
Synonym: cg1225
Alternate gene names: 62389965
Gene position: 1126294-1124999 (Counterclockwise)
Preceding gene: 62389966
Following gene: 62389963
Centisome position: 34.31
GC content: 56.94
Gene sequence:
>1296_bases GTGTCAACGACCACCCCAACCCGCGCAACCAAAAGTGTCGGAACAGTTCTCGCACTCCTGTGGTTCGCAATTGTCCTCGA CGGCTTTGACCTAGTCGTCCTGGGTGCAACAATCCCGTCCATGCTGGAGGATCCCGCGTGGGATCTCACTGCTGGACAGG CCACACAGATTTCCACCATCGGCCTCGTCGGCATGACCATTGGCGCACTGACCATCGGTTTCTTAACGGACCGTCTGGGT CGACGCCGTGTCATGCTGTTCTCTGTGGCAGTATTTTCTGTATTCACTCTCCTGCTGGCATTCACCACCAACGTCCAGCT CTTCAGCCTGTGGCGTTTCCTCGCAGGTGTTGGCCTTGGTGGAGCACTCCCCACCGCAATTGCCATGGTGACCGAGTTCC GCCCCGGCACCAAAGCGGGCTCTGCATCCACCACCTTGATGACCGGCTACCACGTCGGCGCAGTAGCAACCGCCTTCCTT GGCCTCTTCCTTATCGACGGCTTTGGTTGGCACTCCATGTTCATCGCAGGTGCCGTACCAGGACTGATCCTGCTACCACT GCTGTACTTCTTCCTTCCAGAATCCCCGCAGTACCTCAAAATCTCCGGCAAGTTGGATGAGGCGCAGGCAGTTGCAGCAT CTTATGGACTTTCCCTGGATGATGATCTTGATCGCGAACACGAAGAAGAACTCGGCGAGTCCTCCTCACTTTCCTCCCTG TTCAAGCCCTCGTTCCGCCGCAACACCCTGGCGATTTGGGGCACCTCATTCATGGGACTCCTCCTGGTCTACGGCCTGAA CACATGGCTGCCACAAATCATGCGCCAAGCAGACTACGACATGGGTAACTCGCTTGGATTCCTCATGGTGCTCAACATCG GCGCAGTGATCGGCCTTTATATTGCAGGGCGAATTGCCGATAAGAACTCCCCTCGCAAAACAGCACTCGTATGGTTCGTG TTCTCTGCATTTTCCCTCGCGTTGCTTGCTGTCCGGATGCCACTGATCGGTCTGTATGGCATCGTGCTGCTCACCGGCAT CTTTGTGTTCAGCTCCCAGGTACTCATCTACGCCTTCGTTGGTGAGAATCACCCTGCCAAGATGCGCGCAACCGCCATGG GATTCTCCGCAGGAATTGGTCGCCTCGGCGCCATCTCTGGCCCGTTGCTTGGTGGTCTGCTTGTCAGTGCCAACCTTGCT TACCCATGGGGCTTCTTCGCTTTCGCTGGCGTCGGTCTGCTGGGCGCGCTGATTTTCTCCGCATCGAAGACTCTGAGGCA TCGCGAGAACGCTTAA
Upstream 100 bases:
>100_bases CGCTGAATTGCGCTCCGTCCTAGAATCCCAATCCGGCCAACGCTACCTCGCAGAGCAGTACGTTGGGCGCGACCTACCAC GCTTCGAGGTATAAACGCTC
Downstream 100 bases:
>100_bases GTTTTAACACTGAAAAAGGTCGTTGCATTTTCTTGAGGTTGAAAATGCAACGATCTTTTTATGCTTTTAGTCTGAGGAAA TATTCCACATCACACCAAAT
Product: benzoate transport transmembrane protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSTTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLG RRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFL GLFLIDGFGWHSMFIAGAVPGLILLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSL FKPSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRIADKNSPRKTALVWFV FSAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLA YPWGFFAFAGVGLLGALIFSASKTLRHRENA
Sequences:
>Translated_431_residues MSTTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLG RRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFL GLFLIDGFGWHSMFIAGAVPGLILLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSL FKPSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRIADKNSPRKTALVWFV FSAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLA YPWGFFAFAGVGLLGALIFSASKTLRHRENA >Mature_430_residues STTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLGR RRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLG LFLIDGFGWHSMFIAGAVPGLILLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLF KPSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRIADKNSPRKTALVWFVF SAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAY PWGFFAFAGVGLLGALIFSASKTLRHRENA
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=424, Percent_Identity=24.0566037735849, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI216548223, Length=311, Percent_Identity=27.9742765273312, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI7662270, Length=199, Percent_Identity=31.6582914572864, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI166064021, Length=350, Percent_Identity=26.2857142857143, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI262399383, Length=162, Percent_Identity=33.9506172839506, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI213021148, Length=412, Percent_Identity=22.5728155339806, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI24497490, Length=360, Percent_Identity=24.1666666666667, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI24497476, Length=398, Percent_Identity=25.3768844221106, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI20070188, Length=398, Percent_Identity=25.3768844221106, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI31542327, Length=407, Percent_Identity=26.2899262899263, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI73695465, Length=163, Percent_Identity=30.6748466257669, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI11415038, Length=261, Percent_Identity=29.1187739463602, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4507005, Length=359, Percent_Identity=23.6768802228412, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI166197673, Length=374, Percent_Identity=23.5294117647059, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI87081723, Length=344, Percent_Identity=31.1046511627907, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1788068, Length=393, Percent_Identity=25.4452926208651, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786229, Length=379, Percent_Identity=26.1213720316623, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788074, Length=410, Percent_Identity=26.5853658536585, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI87082404, Length=376, Percent_Identity=22.8723404255319, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87082231, Length=444, Percent_Identity=22.972972972973, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082159, Length=383, Percent_Identity=26.3707571801567, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564663, Length=422, Percent_Identity=23.2227488151659, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71986689, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202825, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922874, Length=431, Percent_Identity=20.8816705336427, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640198, Length=301, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24640196, Length=301, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24640200, Length=301, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24648211, Length=232, Percent_Identity=27.1551724137931, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24649618, Length=374, Percent_Identity=23.7967914438503, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI20130083, Length=307, Percent_Identity=28.3387622149837, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922616, Length=418, Percent_Identity=21.5311004784689, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24649616, Length=377, Percent_Identity=23.8726790450928, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161077756, Length=420, Percent_Identity=22.3809523809524, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46012; Mature: 45880
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCCCHHHHH GLVGMTIGALTIGFLTDRLGRRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLFLIDGFGWHSMFIAGAVP HHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GLILLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSL HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH FKPSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLY HCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IAGRIADKNSPRKTALVWFVFSAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE GENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPWGFFAFAGVGLLGALIFS CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ASKTLRHRENA HHHHHHHCCCC >Mature Secondary Structure STTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTI CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCCCHHHHH GLVGMTIGALTIGFLTDRLGRRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLFLIDGFGWHSMFIAGAVP HHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GLILLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSL HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH FKPSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLY HCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IAGRIADKNSPRKTALVWFVFSAFSLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE GENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPWGFFAFAGVGLLGALIFS CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ASKTLRHRENA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]