Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is 62389147
Identifier: 62389147
GI number: 62389147
Start: 268256
End: 268948
Strand: Reverse
Name: 62389147
Synonym: cg0304
Alternate gene names: NA
Gene position: 268948-268256 (Counterclockwise)
Preceding gene: 62389152
Following gene: 161486723
Centisome position: 8.19
GC content: 51.66
Gene sequence:
>693_bases ATGCTGGCATATTTCTTACAAACAGTAGCACTTGGTTTCGGCACCCTCTTGGTAGTGCAACCAGTGCTTGTCCTGTCGCT GATGTTCACGCTGCCGCTCTCAGCACGATTCAATGGCTACCGACTACGCCGAACTGAAATCTTCTGGGCTACCCTCCTCA CCGTAGCCGTGGGCATCATGATCGTTTTGGGACGCCCCCTTCCCGGAAACCCCCACCCCCCACTCGATCGATGGATTCCA GTACTTTTAGTCGGCGTTGCAGTAATGGGTGGAATGTGGCTGCTTGCGGAATACGTATTAAAGAAGGACAAAGCCCTCAT CCTTGGTCTTGTGACGGGTGCATTGTTTGGCTACGTAGCAGTGATGTCCAAAGCCGCGGTGGATCTTTTTGTCCATCAAG GCATAACGGGACTCATCTTGAACTGGGAAGGCTACGGCCTAATCCTCACCGCATTACTTGGAACAATCGTGCAGCAGTAT TCCTTTAACGCTGGCGAACTACAAAAATCGCTACCCGCCATGACCATTGCCGAACCAATTGTTGCCTTCAGTTTGGGCTA CTTGGTTCTGGGCGAAAAATTCCAAGTCGTGGACTGGGAATGGATCGCCATGGGCATCGCACTACTGGTGATGATTGTTT CCACCATTGCACTGTCTCGTACAAGCACAATGCCGGCCGGATCGAAAAGGTAA
Upstream 100 bases:
>100_bases ACCGGATCGCGCTCCGCACCCCAAAAGATGGCTCCCTAAGGAGCTCACCTTTACTCAATGCTCTGATGACACCGATGTGG TGGGCAGGCATGAGTACGCG
Downstream 100 bases:
>100_bases AACTCCAAAGTTCCCCCCGAGACATGACAGCACTGGAACTGGGCGTCGAAAAGCTTTTTTAAAAGAAAACTCCCCCGAGT TGCTACCCACACCACAAAGT
Product: membrane protein
Products: NA
Alternate protein names: ORFX
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLAYFLQTVALGFGTLLVVQPVLVLSLMFTLPLSARFNGYRLRRTEIFWATLLTVAVGIMIVLGRPLPGNPHPPLDRWIP VLLVGVAVMGGMWLLAEYVLKKDKALILGLVTGALFGYVAVMSKAAVDLFVHQGITGLILNWEGYGLILTALLGTIVQQY SFNAGELQKSLPAMTIAEPIVAFSLGYLVLGEKFQVVDWEWIAMGIALLVMIVSTIALSRTSTMPAGSKR
Sequences:
>Translated_230_residues MLAYFLQTVALGFGTLLVVQPVLVLSLMFTLPLSARFNGYRLRRTEIFWATLLTVAVGIMIVLGRPLPGNPHPPLDRWIP VLLVGVAVMGGMWLLAEYVLKKDKALILGLVTGALFGYVAVMSKAAVDLFVHQGITGLILNWEGYGLILTALLGTIVQQY SFNAGELQKSLPAMTIAEPIVAFSLGYLVLGEKFQVVDWEWIAMGIALLVMIVSTIALSRTSTMPAGSKR >Mature_230_residues MLAYFLQTVALGFGTLLVVQPVLVLSLMFTLPLSARFNGYRLRRTEIFWATLLTVAVGIMIVLGRPLPGNPHPPLDRWIP VLLVGVAVMGGMWLLAEYVLKKDKALILGLVTGALFGYVAVMSKAAVDLFVHQGITGLILNWEGYGLILTALLGTIVQQY SFNAGELQKSLPAMTIAEPIVAFSLGYLVLGEKFQVVDWEWIAMGIALLVMIVSTIALSRTSTMPAGSKR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y250_CORGL (P42459)
Other databases:
- EMBL: X70959 - EMBL: BA000036 - EMBL: BX927148 - PIR: I40724 - RefSeq: NP_599503.2 - RefSeq: YP_224549.1 - GeneID: 1021165 - GeneID: 3343063 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg0304 - KEGG: cgl:NCgl0246 - HOGENOM: HBG580145 - OMA: FNAGPLK - ProtClustDB: CLSK638670 - BioCyc: CGLU196627:CG0304-MONOMER - InterPro: IPR008521
Pfam domain/function: PF05653 DUF803
EC number: NA
Molecular weight: Translated: 25005; Mature: 25005
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x10f8d154)-; HASH(0x1183932c)-; HASH(0x11c452f8)-; HASH(0x11976dbc)-; HASH(0x118d08a0)-; HASH(0x11153ffc)-; HASH(0x1157cee0)-; HASH(0x10c504cc)-; HASH(0x10ecbdd4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAYFLQTVALGFGTLLVVQPVLVLSLMFTLPLSARFNGYRLRRTEIFWATLLTVAVGIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH IVLGRPLPGNPHPPLDRWIPVLLVGVAVMGGMWLLAEYVLKKDKALILGLVTGALFGYVA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VMSKAAVDLFVHQGITGLILNWEGYGLILTALLGTIVQQYSFNAGELQKSLPAMTIAEPI HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH VAFSLGYLVLGEKFQVVDWEWIAMGIALLVMIVSTIALSRTSTMPAGSKR HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH >Mature Secondary Structure MLAYFLQTVALGFGTLLVVQPVLVLSLMFTLPLSARFNGYRLRRTEIFWATLLTVAVGIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH IVLGRPLPGNPHPPLDRWIPVLLVGVAVMGGMWLLAEYVLKKDKALILGLVTGALFGYVA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VMSKAAVDLFVHQGITGLILNWEGYGLILTALLGTIVQQYSFNAGELQKSLPAMTIAEPI HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH VAFSLGYLVLGEKFQVVDWEWIAMGIALLVMIVSTIALSRTSTMPAGSKR HHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8117072; 12948626