Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is sixA
Identifier: 62389003
GI number: 62389003
Start: 120411
End: 120923
Strand: Reverse
Name: sixA
Synonym: cg0142
Alternate gene names: NA
Gene position: 120923-120411 (Counterclockwise)
Preceding gene: 62389004
Following gene: 62389001
Centisome position: 3.68
GC content: 51.27
Gene sequence:
>513_bases ATGTCTCCCACACATCGCCTCGTCATCCTTAGACACGCCAAATCTTCCTGGTCCACCGGAGTACTCGACCATAAACGCCC ACTTAATCAACGTGGGCTTCGCGATGGCGTGGCAGCTGGCCAATGGCTAGCTGGCAACATCGGCGAAATTGATCATGTGC TGTGTTCAGATGCCACCCGCACACAATTAACGTGGGAACGCGTCCAGCTTGGTGGCGCAACCGCCAAAGGCTCTAGCTTC CACAATGACATCTATGAAAACCAAGTGTCTGAATTTAAACATTTAATAACAGGGCTCCCAGATGTAGTTGGTACCGCCCT ACTCATCGGGCACTGGCCAGGCGTGGAAGAACTAGCCCATTATTTTGGCATCCGCGATGAACATCCCGGTTGGGATCAGA TGGAAGAAAAGTTTCCCACCAGCGCCATTGCGGTGTTGGAATTTAACACCCCTTGGTCAAAACTTGAGAGAAACTCTGCT CGGTTGACAGATTTTGTCATTCCACGGGGTTAG
Upstream 100 bases:
>100_bases GAGACACTGTCCTCCCTTCATGACCGTGGCGCGGAAGCAACCATCGATGCACTTCTTACGCAGGTAACTGTCTAAATCCG TTGCGCGCTAGGGTTGAGGC
Downstream 100 bases:
>100_bases TTCTGCTTCAATTGAACAATCTGAATTAGGTTTCCTACGGTGTCATCGAGAATGGCAATCACTGAAGGGCCCACATCGGT TGGTTCCATGATGAAATCCA
Product: phosphohistidine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSPTHRLVILRHAKSSWSTGVLDHKRPLNQRGLRDGVAAGQWLAGNIGEIDHVLCSDATRTQLTWERVQLGGATAKGSSF HNDIYENQVSEFKHLITGLPDVVGTALLIGHWPGVEELAHYFGIRDEHPGWDQMEEKFPTSAIAVLEFNTPWSKLERNSA RLTDFVIPRG
Sequences:
>Translated_170_residues MSPTHRLVILRHAKSSWSTGVLDHKRPLNQRGLRDGVAAGQWLAGNIGEIDHVLCSDATRTQLTWERVQLGGATAKGSSF HNDIYENQVSEFKHLITGLPDVVGTALLIGHWPGVEELAHYFGIRDEHPGWDQMEEKFPTSAIAVLEFNTPWSKLERNSA RLTDFVIPRG >Mature_169_residues SPTHRLVILRHAKSSWSTGVLDHKRPLNQRGLRDGVAAGQWLAGNIGEIDHVLCSDATRTQLTWERVQLGGATAKGSSFH NDIYENQVSEFKHLITGLPDVVGTALLIGHWPGVEELAHYFGIRDEHPGWDQMEEKFPTSAIAVLEFNTPWSKLERNSAR LTDFVIPRG
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 18987; Mature: 18855
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTHRLVILRHAKSSWSTGVLDHKRPLNQRGLRDGVAAGQWLAGNIGEIDHVLCSDATR CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCH TQLTWERVQLGGATAKGSSFHNDIYENQVSEFKHLITGLPDVVGTALLIGHWPGVEELAH HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH YFGIRDEHPGWDQMEEKFPTSAIAVLEFNTPWSKLERNSARLTDFVIPRG HCCCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHCCCCHHHHEECCCC >Mature Secondary Structure SPTHRLVILRHAKSSWSTGVLDHKRPLNQRGLRDGVAAGQWLAGNIGEIDHVLCSDATR CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCH TQLTWERVQLGGATAKGSSFHNDIYENQVSEFKHLITGLPDVVGTALLIGHWPGVEELAH HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH YFGIRDEHPGWDQMEEKFPTSAIAVLEFNTPWSKLERNSARLTDFVIPRG HCCCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHCCCCHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]