| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185534
Identifier: 62185534
GI number: 62185534
Start: 1091517
End: 1093337
Strand: Direct
Name: 62185534
Synonym: CAB934
Alternate gene names: NA
Gene position: 1091517-1093337 (Clockwise)
Preceding gene: 62185533
Following gene: 62185535
Centisome position: 95.38
GC content: 38.88
Gene sequence:
>1821_bases ATGAAACAAACTTTTACCAAACGCATTTTGTTGTTTCTTTTTTTGGTAATTCCGATTCCTTTAATTTTGAATCTGGTCGT CCTCTCCCTATTTTCTTTTTCAGCAGCAAAAAGCAATCTCATGGAAAACCTCCATACCCATGCGACAAATTTTAGCTTGG AATTTGAAAAAAAACTCACCATTCATAAGGTTTTCCTGAAACGTCTGGCAAACACATTAGCACTAAAAGCCTACTCCTCA TCGTCAGAAGATTGCTATTCTCAAGCTTATAACGAGATGTTCGCCCTATCCAACATGAATTTCTCGCTTTGTCTTATTCC TCTCGTACAAGGAAACATAAAAACAAAAACTCCCCACGATCCATTTATCCATTATTTAAAGGAGCATCCTGAAATAAAAA AGAAGCTCAGCATGTCTGTAGGGAAGGCATGCCTCATTACTGTTCCCTCAAGCTCGAATACGCATTTTACACACTATCTA GTGATTACTGAAGATATCGAAGTATGGAATTCACCTACAAGCGCAGGGCTCCTAGTTAGCTTCTACCCTATGGATTTTCT ACAAAGAGACCTTTTTAAATCCCTACACTTAAAAGATGAAGACATCTGCCTCCTGAATAAATACGGTGAGGTCCTCTTTG CCTCATCTCCTCAATTCTCCTCAGAAGTATTTTCATTGGATATTGCGGATCTTCCTAAAATCACGGCTAGAAAACAAGCC ACTCCCCTTGAAGCCGCACCAAAAATCCTTCACGAACAAAAACTGATAAGCGTAAAAATAAAAAATAAACGCTATCTAGG GCTCGTTTTAAACAAGCTTCCTATTCAAGGAACGTACACCCTATCTATTATTCCTCTCTCTTGGTTGGTGATTAAGGCGA TCCGTCTCCCTCTCAACGTCATTTTCTTTTATTCTCTAGCCTTTATCTTCATGGGATGGATACTTTCTAAAATTAACAAA CGATTAAATCAACCTATTCAAGAACTTACCACATGCATGGAAGCCGCATGGAGAGGAAATCATAATATCCGTTACGAACC CCAGCCCTACGGATATGAAATTAACGAATTAGGAAACATTTTTAACTGCACATTACTGTTGTTACTCAACTCCAAAGAAA AAGCAGAAATCGAACGTCTTTCTGGAGATAAGCTGCAAAAAGAATTAGCTATTCTTTCTTCGCTGCAAAAAGCATTACTC CGTCCTGATTTTCCAGAGTTTCCTAATGTTTCTTTTATTTCGAAACATCTCCAAGGCATGCAAAGATCTGGCCATTTTTA CGGATGGAAAACCTCAATTCCTGAGCAAAGTTTCGTAGGTGTTATAGGCCTGGCTGGTGATATAGGACTGCCGTCTTATC TTTATGCCCTATCAGCACGAAGTTTATTTCTTGCCTATGCTAATCTGTCTTCTTCCTTAGAAAACATTTGCTCCCATACT TTCGAAGCGTTTGGGCAAACTACAGAAGGAGATGAAGCAACCATCTCCATGACATTTATTCGCTACTGCTCAACTGATAG GAAGTTATCTATCTTATCTGCAGGAGAAACACCCCCTGTAGCCTTTTTAAAAAGACAAGAAACATTTTCTCGTCTTATTT CGCCCTCCGTTCAGAACATACAACCCGGCGATGTCCTGGTGTGCATCACAGGAAATAAAGAACTTACAGAATATCTCTTG CGCTTACCTATTGAAGAGTTGATTAGAGATCCTTTAGCCCCTCTAAATTCAGACAACTTTATAGAAACTCTTACAGACAT GCTAAATAAGGAAACTCAATCACAAATCGATGGTACCCTAAGCTTTTTATCTTTCTTCTAA
Upstream 100 bases:
>100_bases AAGATGCTATGCATTCTTTAATACTCTCTGTGAAAACCTTCGTAGGGAATTGCCATCAACACGATGATATTACCTTACTG ATCCTTAAAATATCAGACTT
Downstream 100 bases:
>100_bases ATGAAGATTTTCAATAGTTATACTTTCACTTCCGGGTTCTCTTCTAGGTCCTTTGCCTAACCATAGTAGCACCCCTGAAA TTACAAGAGCAAGAACACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MKQTFTKRILLFLFLVIPIPLILNLVVLSLFSFSAAKSNLMENLHTHATNFSLEFEKKLTIHKVFLKRLANTLALKAYSS SSEDCYSQAYNEMFALSNMNFSLCLIPLVQGNIKTKTPHDPFIHYLKEHPEIKKKLSMSVGKACLITVPSSSNTHFTHYL VITEDIEVWNSPTSAGLLVSFYPMDFLQRDLFKSLHLKDEDICLLNKYGEVLFASSPQFSSEVFSLDIADLPKITARKQA TPLEAAPKILHEQKLISVKIKNKRYLGLVLNKLPIQGTYTLSIIPLSWLVIKAIRLPLNVIFFYSLAFIFMGWILSKINK RLNQPIQELTTCMEAAWRGNHNIRYEPQPYGYEINELGNIFNCTLLLLLNSKEKAEIERLSGDKLQKELAILSSLQKALL RPDFPEFPNVSFISKHLQGMQRSGHFYGWKTSIPEQSFVGVIGLAGDIGLPSYLYALSARSLFLAYANLSSSLENICSHT FEAFGQTTEGDEATISMTFIRYCSTDRKLSILSAGETPPVAFLKRQETFSRLISPSVQNIQPGDVLVCITGNKELTEYLL RLPIEELIRDPLAPLNSDNFIETLTDMLNKETQSQIDGTLSFLSFF
Sequences:
>Translated_606_residues MKQTFTKRILLFLFLVIPIPLILNLVVLSLFSFSAAKSNLMENLHTHATNFSLEFEKKLTIHKVFLKRLANTLALKAYSS SSEDCYSQAYNEMFALSNMNFSLCLIPLVQGNIKTKTPHDPFIHYLKEHPEIKKKLSMSVGKACLITVPSSSNTHFTHYL VITEDIEVWNSPTSAGLLVSFYPMDFLQRDLFKSLHLKDEDICLLNKYGEVLFASSPQFSSEVFSLDIADLPKITARKQA TPLEAAPKILHEQKLISVKIKNKRYLGLVLNKLPIQGTYTLSIIPLSWLVIKAIRLPLNVIFFYSLAFIFMGWILSKINK RLNQPIQELTTCMEAAWRGNHNIRYEPQPYGYEINELGNIFNCTLLLLLNSKEKAEIERLSGDKLQKELAILSSLQKALL RPDFPEFPNVSFISKHLQGMQRSGHFYGWKTSIPEQSFVGVIGLAGDIGLPSYLYALSARSLFLAYANLSSSLENICSHT FEAFGQTTEGDEATISMTFIRYCSTDRKLSILSAGETPPVAFLKRQETFSRLISPSVQNIQPGDVLVCITGNKELTEYLL RLPIEELIRDPLAPLNSDNFIETLTDMLNKETQSQIDGTLSFLSFF >Mature_606_residues MKQTFTKRILLFLFLVIPIPLILNLVVLSLFSFSAAKSNLMENLHTHATNFSLEFEKKLTIHKVFLKRLANTLALKAYSS SSEDCYSQAYNEMFALSNMNFSLCLIPLVQGNIKTKTPHDPFIHYLKEHPEIKKKLSMSVGKACLITVPSSSNTHFTHYL VITEDIEVWNSPTSAGLLVSFYPMDFLQRDLFKSLHLKDEDICLLNKYGEVLFASSPQFSSEVFSLDIADLPKITARKQA TPLEAAPKILHEQKLISVKIKNKRYLGLVLNKLPIQGTYTLSIIPLSWLVIKAIRLPLNVIFFYSLAFIFMGWILSKINK RLNQPIQELTTCMEAAWRGNHNIRYEPQPYGYEINELGNIFNCTLLLLLNSKEKAEIERLSGDKLQKELAILSSLQKALL RPDFPEFPNVSFISKHLQGMQRSGHFYGWKTSIPEQSFVGVIGLAGDIGLPSYLYALSARSLFLAYANLSSSLENICSHT FEAFGQTTEGDEATISMTFIRYCSTDRKLSILSAGETPPVAFLKRQETFSRLISPSVQNIQPGDVLVCITGNKELTEYLL RLPIEELIRDPLAPLNSDNFIETLTDMLNKETQSQIDGTLSFLSFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68560; Mature: 68560
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTFTKRILLFLFLVIPIPLILNLVVLSLFSFSAAKSNLMENLHTHATNFSLEFEKKLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH IHKVFLKRLANTLALKAYSSSSEDCYSQAYNEMFALSNMNFSLCLIPLVQGNIKTKTPHD HHHHHHHHHHHHHEEHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC PFIHYLKEHPEIKKKLSMSVGKACLITVPSSSNTHFTHYLVITEDIEVWNSPTSAGLLVS HHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECHHHCCCCCCCCEEEE FYPMDFLQRDLFKSLHLKDEDICLLNKYGEVLFASSPQFSSEVFSLDIADLPKITARKQA ECCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCHHEEEEHHHCCCHHHHCCC TPLEAAPKILHEQKLISVKIKNKRYLGLVLNKLPIQGTYTLSIIPLSWLVIKAIRLPLNV CCHHHHHHHHHHCCEEEEEECCCEEEEHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH IFFYSLAFIFMGWILSKINKRLNQPIQELTTCMEAAWRGNHNIRYEPQPYGYEINELGNI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEHHHHCCH FNCTLLLLLNSKEKAEIERLSGDKLQKELAILSSLQKALLRPDFPEFPNVSFISKHLQGM HHEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRSGHFYGWKTSIPEQSFVGVIGLAGDIGLPSYLYALSARSLFLAYANLSSSLENICSHT HHCCCEECEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAFGQTTEGDEATISMTFIRYCSTDRKLSILSAGETPPVAFLKRQETFSRLISPSVQNI HHHHCCCCCCCCCEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC QPGDVLVCITGNKELTEYLLRLPIEELIRDPLAPLNSDNFIETLTDMLNKETQSQIDGTL CCCCEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHH SFLSFF HHHHCC >Mature Secondary Structure MKQTFTKRILLFLFLVIPIPLILNLVVLSLFSFSAAKSNLMENLHTHATNFSLEFEKKLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH IHKVFLKRLANTLALKAYSSSSEDCYSQAYNEMFALSNMNFSLCLIPLVQGNIKTKTPHD HHHHHHHHHHHHHEEHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC PFIHYLKEHPEIKKKLSMSVGKACLITVPSSSNTHFTHYLVITEDIEVWNSPTSAGLLVS HHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECHHHCCCCCCCCEEEE FYPMDFLQRDLFKSLHLKDEDICLLNKYGEVLFASSPQFSSEVFSLDIADLPKITARKQA ECCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCHHEEEEHHHCCCHHHHCCC TPLEAAPKILHEQKLISVKIKNKRYLGLVLNKLPIQGTYTLSIIPLSWLVIKAIRLPLNV CCHHHHHHHHHHCCEEEEEECCCEEEEHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH IFFYSLAFIFMGWILSKINKRLNQPIQELTTCMEAAWRGNHNIRYEPQPYGYEINELGNI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEHHHHCCH FNCTLLLLLNSKEKAEIERLSGDKLQKELAILSSLQKALLRPDFPEFPNVSFISKHLQGM HHEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRSGHFYGWKTSIPEQSFVGVIGLAGDIGLPSYLYALSARSLFLAYANLSSSLENICSHT HHCCCEECEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAFGQTTEGDEATISMTFIRYCSTDRKLSILSAGETPPVAFLKRQETFSRLISPSVQNI HHHHCCCCCCCCCEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC QPGDVLVCITGNKELTEYLLRLPIEELIRDPLAPLNSDNFIETLTDMLNKETQSQIDGTL CCCCEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHH SFLSFF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA