| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185535
Identifier: 62185535
GI number: 62185535
Start: 1093897
End: 1096788
Strand: Direct
Name: 62185535
Synonym: CAB935
Alternate gene names: NA
Gene position: 1093897-1096788 (Clockwise)
Preceding gene: 62185534
Following gene: 62185541
Centisome position: 95.59
GC content: 40.53
Gene sequence:
>2892_bases ATGTCACGACTGGATTTTTTTGTTTTTGATTCACTAGTTCTTAAGCAAAAGCATAATGAGTTAGAAGAGATCTTCTGCTC AGAAAATGATGATCTATTTCGTGCTTATCAGACGACTGCTCTACAGTCTCCCCTAGCCGCAAAAAACCTTACCATCGCAA GAAATACAGCACGTTATATCCTTACGGAAAACGGGGAAATTGATATCACAAAAGTGGTTTCAGCAAGCGAACATCTAGCG AACTGTCTCTATCCTTTAGGTCCTCATAGACACAATGAAGCTAAACCTAGAGAACACTTATTAAAAATGCTTCAAGCCAT TAAACAAGAACCTGAAATTAGAGAAAGGATAAAAAAACTTTTTGTTCCCTCTTATAGGGTCATTCAAGATCTTATCCGTA ATACCCTAGCTCTCCCTGCAGAGATCGAGCTCACTCCCATTCATGTGCGTCAGGCGGCACTCACAGCCATGTTTTGCTAT TTACGTCAAGACGTGGGTTCGTGTTTTGCAACAGCGTTTGCGATTATCATTCATCAAGAACACCCCGCCTTGTTCATAAA AGATATCGATGATTTGCTTACCTCAGGGAAACTTACAAGAATCATCGGCACGCGAGAAGTCTCCGTACCTATGAATTTGT CAGGCTGCATTGGCGAGCTGTTCAAACCCTTAAGAGTATTGGATTTATATCCAGACCCTATAGCGAAACTTTCCGCATCT CCAGGTTTACAAAAAGCATTTTCCGCCGCTGGTGTCATTGACGTCTTAGATGATCCCGAAGTACGTTTGCAGCAAATCCT TGCTCATGAATACCTCATGCATAAACTTCAGCATGTCGATGACACTGTAACAGCTAACGAAATCATTCAGAGTACACTAC TACACCACTACCAAATTACCGAGCACTCTGTACGCGCTACTCTATTTCAGGAAGGATTCTACAGCAAAGAACAAGCTTTT TTCTCTATTGAGCATTCTCATAAGCTCTCTCAAATACAGAGAGTCTATAGTTATCTTTCTGCTTATGAATTAGCTAAATC TGCTTTTATCAGTGATACGCAAAATCTATTACTCAAATCTTGGGAATATACGTTAGCTACCCTCTCCGATGCTCATGATT CCTCAACTCTAAATCACATTCGCATTGCCTTAGGATGGGACGCTGATGATCCTCATAGCTTAGCGCGTATTATCCAAACT TTTGCTCAAGAAGAAATCGAAAAGACTCGTGATCTTATACAACAATGCGAACAGACATATCATGAAGCTCACGCTCAACT AGACTATGTAGAAAGTCGCATGAGAAATCCACTGAATGAGCAAGATAATAAGATCTTGATTATGGATCACGTCCGCTTTC GCCAGGAGTTCAACACAGCTCTCTATGATTGGAATACCGCTCAAGAAAAGGCAAAGAAACTTTGTGCTCTTCCGAATTTC TTACTCTCCTTCTACACCAAGACTATCCCTCAATATTTCCGTAGTTCCTACGATGCCTTTATCCAAGAATTCTCTCACCT TTATACTGATTCCCCTGCAGGATTTCGTATACTATTTACCCACGGGAGAAGCCACCCTAACACCTGGTCTTCCATCTATT CAATTAACGAATTTGTCAGCTTTTTATCAGAATTCTTTTCCTCTACAGAAGTCGACCTTCTGAGTAAACATGGTGTTTTA GGACTAGAAAAAGAAGTTTCAGCTCTCATCCATTACATTGTCTCGTATATTCATAAAAACTCTTTCCAAGAAGCAGCGAT AACACGCATTCTTAAACGCTATAATTCGACAGTTCCTCCTTCAGTTCTTGACAACTTAGATAAGATTTCCCACACCCCTT GGGTCTATGTTTCTGGAGGAACAGTAGTCACCCTATTAAAAGATTACTTCGAAAATGCCGAAGAACTGACATCTATTGAA AAACATCCTGAAAATGCTCATGAATTAGCAGCTTTCTTCTCAGACGCTTTGAAAGATCTCCCCTATGCAATAAAAAGCTA TTTAGAAGATGGCGCGCATTCTTTAATCGCTTCATCTCCCACGCACGTTTTTTCTATAATTGCGGGTTCGCCTCTATTTC GCGAGGCATGGAATAATGATTGGTACAGCTACACTTGGTTACGTGATGTATGGGTAAAGAATCACCAAGACTTCCTAACA GACACGATACTCAATCAACAAGGAATCTATACATTTATAGAAAGATTCTGCACAAAATATAGCCTACAGAATCTCGCTTA CGATTTTCATGATTTTTGTTCCGATCATTCTTTATCACTTCCTGAGCTCTATGAAAAAGCTTCAAGATTCCTAAAAGAAA ACTTCCCCAAATCCGAAAACATCTCTGCCTTATACCAACGACATTTAGCTCACCAAATTGTGCAAGATGTTCCCTATACC TCGGATCAACAGCTCCCCGAGGTTTTAGACAAGCTGAGTTCCTATCTAGGCATCTCGTCAAGAATCACTTATGAGAAATT CGACAAACTCATCCACAAATACATTCCTAACTTTTCTCTATTATCTTCGGGAGAAATTCGTCATCTCTTTAAGGGATTAG TAATGGAAAGTTACCAACGCCTGTATTTCGAAGAAGATATCTTTCTGAGATTAGCAACAGCCATGCGTCATCATCATCTT GCTTATCCCGCTCCCCTGCTCTTTGGAGATAGTAATTGGGCCTACAGCTATTTCGGATTTATCCTTCATCCAGGAACCCA AGAAATCGACCTTTGGCAGTTTAACTATGCTGGTCTACAAGGGTACCCTCTGGAAAACATAGACAAACTACTATCTGTAA CACAACCTTGGATACTCTATGCAAATCCTATAGACTATGGGATGCCTCCCCCTCCAGGATACCGCAGCCATATGCCGAAA GGATTTTTCTAA
Upstream 100 bases:
>100_bases TCCCTGATTTTGATATTCTCTTTAGGGAATCGCTTACTGACAGAAACCTAGAATTCGTGATAAGAAGCAGAAAAAGCCCA AAGTTTTCCTCGTATTTCCT
Downstream 100 bases:
>100_bases TCCTCGTCACAAGAGTTTTTCTTCCTTTTAAAAATCGAACGGAATAAAGATTTTAGAGAGTACTTAGAAATTTCTTTTCC CATAGCAGAAATACTCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 963; Mature: 962
Protein sequence:
>963_residues MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLA NCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCY LRQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAF FSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQT FAQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVL GLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIE KHPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYT SDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHL AYPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK GFF
Sequences:
>Translated_963_residues MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLA NCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCY LRQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAF FSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQT FAQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVL GLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIE KHPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYT SDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHL AYPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK GFF >Mature_962_residues SRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLAN CLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYL RQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSASP GLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAFF SIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTF AQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNFL LSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVLG LEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEK HPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLTD TILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYTS DQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLA YPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPKG FF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 111078; Mature: 110947
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEE LTENGEIDITKVVSASEHLANCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKL EECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH FVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYLRQDVGSCFATAFAIIIHQE HCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC HPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS CCEEHHHHHHHHHCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQIT CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EHSVRATLFQEGFYSKEQAFFSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKS HHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTFAQEEIEKTRDLIQQCEQTY HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FLSEFFSSTEVDLLSKHGVLGLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPP HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH SVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEKHPENAHELAAFFSDALKDL HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH PYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHCCHHHHH DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSEN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC ISALYQRHLAHQIVQDVPYTSDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC LSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLAYPAPLLFGDSNWAYSYFGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHH ILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK EECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC GFF CCC >Mature Secondary Structure SRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEE LTENGEIDITKVVSASEHLANCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKL EECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH FVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYLRQDVGSCFATAFAIIIHQE HCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC HPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS CCEEHHHHHHHHHCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQIT CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EHSVRATLFQEGFYSKEQAFFSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKS HHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTFAQEEIEKTRDLIQQCEQTY HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FLSEFFSSTEVDLLSKHGVLGLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPP HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH SVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEKHPENAHELAAFFSDALKDL HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH PYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHCCHHHHH DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSEN HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC ISALYQRHLAHQIVQDVPYTSDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC LSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLAYPAPLLFGDSNWAYSYFGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHH ILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK EECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC GFF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA