Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

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The map label for this gene is 62185535

Identifier: 62185535

GI number: 62185535

Start: 1093897

End: 1096788

Strand: Direct

Name: 62185535

Synonym: CAB935

Alternate gene names: NA

Gene position: 1093897-1096788 (Clockwise)

Preceding gene: 62185534

Following gene: 62185541

Centisome position: 95.59

GC content: 40.53

Gene sequence:

>2892_bases
ATGTCACGACTGGATTTTTTTGTTTTTGATTCACTAGTTCTTAAGCAAAAGCATAATGAGTTAGAAGAGATCTTCTGCTC
AGAAAATGATGATCTATTTCGTGCTTATCAGACGACTGCTCTACAGTCTCCCCTAGCCGCAAAAAACCTTACCATCGCAA
GAAATACAGCACGTTATATCCTTACGGAAAACGGGGAAATTGATATCACAAAAGTGGTTTCAGCAAGCGAACATCTAGCG
AACTGTCTCTATCCTTTAGGTCCTCATAGACACAATGAAGCTAAACCTAGAGAACACTTATTAAAAATGCTTCAAGCCAT
TAAACAAGAACCTGAAATTAGAGAAAGGATAAAAAAACTTTTTGTTCCCTCTTATAGGGTCATTCAAGATCTTATCCGTA
ATACCCTAGCTCTCCCTGCAGAGATCGAGCTCACTCCCATTCATGTGCGTCAGGCGGCACTCACAGCCATGTTTTGCTAT
TTACGTCAAGACGTGGGTTCGTGTTTTGCAACAGCGTTTGCGATTATCATTCATCAAGAACACCCCGCCTTGTTCATAAA
AGATATCGATGATTTGCTTACCTCAGGGAAACTTACAAGAATCATCGGCACGCGAGAAGTCTCCGTACCTATGAATTTGT
CAGGCTGCATTGGCGAGCTGTTCAAACCCTTAAGAGTATTGGATTTATATCCAGACCCTATAGCGAAACTTTCCGCATCT
CCAGGTTTACAAAAAGCATTTTCCGCCGCTGGTGTCATTGACGTCTTAGATGATCCCGAAGTACGTTTGCAGCAAATCCT
TGCTCATGAATACCTCATGCATAAACTTCAGCATGTCGATGACACTGTAACAGCTAACGAAATCATTCAGAGTACACTAC
TACACCACTACCAAATTACCGAGCACTCTGTACGCGCTACTCTATTTCAGGAAGGATTCTACAGCAAAGAACAAGCTTTT
TTCTCTATTGAGCATTCTCATAAGCTCTCTCAAATACAGAGAGTCTATAGTTATCTTTCTGCTTATGAATTAGCTAAATC
TGCTTTTATCAGTGATACGCAAAATCTATTACTCAAATCTTGGGAATATACGTTAGCTACCCTCTCCGATGCTCATGATT
CCTCAACTCTAAATCACATTCGCATTGCCTTAGGATGGGACGCTGATGATCCTCATAGCTTAGCGCGTATTATCCAAACT
TTTGCTCAAGAAGAAATCGAAAAGACTCGTGATCTTATACAACAATGCGAACAGACATATCATGAAGCTCACGCTCAACT
AGACTATGTAGAAAGTCGCATGAGAAATCCACTGAATGAGCAAGATAATAAGATCTTGATTATGGATCACGTCCGCTTTC
GCCAGGAGTTCAACACAGCTCTCTATGATTGGAATACCGCTCAAGAAAAGGCAAAGAAACTTTGTGCTCTTCCGAATTTC
TTACTCTCCTTCTACACCAAGACTATCCCTCAATATTTCCGTAGTTCCTACGATGCCTTTATCCAAGAATTCTCTCACCT
TTATACTGATTCCCCTGCAGGATTTCGTATACTATTTACCCACGGGAGAAGCCACCCTAACACCTGGTCTTCCATCTATT
CAATTAACGAATTTGTCAGCTTTTTATCAGAATTCTTTTCCTCTACAGAAGTCGACCTTCTGAGTAAACATGGTGTTTTA
GGACTAGAAAAAGAAGTTTCAGCTCTCATCCATTACATTGTCTCGTATATTCATAAAAACTCTTTCCAAGAAGCAGCGAT
AACACGCATTCTTAAACGCTATAATTCGACAGTTCCTCCTTCAGTTCTTGACAACTTAGATAAGATTTCCCACACCCCTT
GGGTCTATGTTTCTGGAGGAACAGTAGTCACCCTATTAAAAGATTACTTCGAAAATGCCGAAGAACTGACATCTATTGAA
AAACATCCTGAAAATGCTCATGAATTAGCAGCTTTCTTCTCAGACGCTTTGAAAGATCTCCCCTATGCAATAAAAAGCTA
TTTAGAAGATGGCGCGCATTCTTTAATCGCTTCATCTCCCACGCACGTTTTTTCTATAATTGCGGGTTCGCCTCTATTTC
GCGAGGCATGGAATAATGATTGGTACAGCTACACTTGGTTACGTGATGTATGGGTAAAGAATCACCAAGACTTCCTAACA
GACACGATACTCAATCAACAAGGAATCTATACATTTATAGAAAGATTCTGCACAAAATATAGCCTACAGAATCTCGCTTA
CGATTTTCATGATTTTTGTTCCGATCATTCTTTATCACTTCCTGAGCTCTATGAAAAAGCTTCAAGATTCCTAAAAGAAA
ACTTCCCCAAATCCGAAAACATCTCTGCCTTATACCAACGACATTTAGCTCACCAAATTGTGCAAGATGTTCCCTATACC
TCGGATCAACAGCTCCCCGAGGTTTTAGACAAGCTGAGTTCCTATCTAGGCATCTCGTCAAGAATCACTTATGAGAAATT
CGACAAACTCATCCACAAATACATTCCTAACTTTTCTCTATTATCTTCGGGAGAAATTCGTCATCTCTTTAAGGGATTAG
TAATGGAAAGTTACCAACGCCTGTATTTCGAAGAAGATATCTTTCTGAGATTAGCAACAGCCATGCGTCATCATCATCTT
GCTTATCCCGCTCCCCTGCTCTTTGGAGATAGTAATTGGGCCTACAGCTATTTCGGATTTATCCTTCATCCAGGAACCCA
AGAAATCGACCTTTGGCAGTTTAACTATGCTGGTCTACAAGGGTACCCTCTGGAAAACATAGACAAACTACTATCTGTAA
CACAACCTTGGATACTCTATGCAAATCCTATAGACTATGGGATGCCTCCCCCTCCAGGATACCGCAGCCATATGCCGAAA
GGATTTTTCTAA

Upstream 100 bases:

>100_bases
TCCCTGATTTTGATATTCTCTTTAGGGAATCGCTTACTGACAGAAACCTAGAATTCGTGATAAGAAGCAGAAAAAGCCCA
AAGTTTTCCTCGTATTTCCT

Downstream 100 bases:

>100_bases
TCCTCGTCACAAGAGTTTTTCTTCCTTTTAAAAATCGAACGGAATAAAGATTTTAGAGAGTACTTAGAAATTTCTTTTCC
CATAGCAGAAATACTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 963; Mature: 962

Protein sequence:

>963_residues
MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLA
NCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCY
LRQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS
PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAF
FSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQT
FAQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF
LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVL
GLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIE
KHPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT
DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYT
SDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHL
AYPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK
GFF

Sequences:

>Translated_963_residues
MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLA
NCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCY
LRQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS
PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAF
FSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQT
FAQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF
LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVL
GLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIE
KHPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT
DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYT
SDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHL
AYPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK
GFF
>Mature_962_residues
SRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYILTENGEIDITKVVSASEHLAN
CLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKLFVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYL
RQDVGSCFATAFAIIIHQEHPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSASP
GLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQITEHSVRATLFQEGFYSKEQAFF
SIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKSWEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTF
AQEEIEKTRDLIQQCEQTYHEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNFL
LSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVSFLSEFFSSTEVDLLSKHGVLG
LEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPPSVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEK
HPENAHELAAFFSDALKDLPYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLTD
TILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSENISALYQRHLAHQIVQDVPYTS
DQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSLLSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLA
YPAPLLFGDSNWAYSYFGFILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPKG
FF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 111078; Mature: 110947

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEE
LTENGEIDITKVVSASEHLANCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKL
EECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
FVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYLRQDVGSCFATAFAIIIHQE
HCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
HPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS
CCEEHHHHHHHHHCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQIT
CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EHSVRATLFQEGFYSKEQAFFSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKS
HHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTFAQEEIEKTRDLIQQCEQTY
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF
HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FLSEFFSSTEVDLLSKHGVLGLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPP
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
SVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEKHPENAHELAAFFSDALKDL
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHCCHHHHH
DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ISALYQRHLAHQIVQDVPYTSDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
LSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLAYPAPLLFGDSNWAYSYFGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHH
ILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK
EECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
GFF
CCC
>Mature Secondary Structure 
SRLDFFVFDSLVLKQKHNELEEIFCSENDDLFRAYQTTALQSPLAAKNLTIARNTARYI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEE
LTENGEIDITKVVSASEHLANCLYPLGPHRHNEAKPREHLLKMLQAIKQEPEIRERIKKL
EECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
FVPSYRVIQDLIRNTLALPAEIELTPIHVRQAALTAMFCYLRQDVGSCFATAFAIIIHQE
HCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
HPALFIKDIDDLLTSGKLTRIIGTREVSVPMNLSGCIGELFKPLRVLDLYPDPIAKLSAS
CCEEHHHHHHHHHCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
PGLQKAFSAAGVIDVLDDPEVRLQQILAHEYLMHKLQHVDDTVTANEIIQSTLLHHYQIT
CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EHSVRATLFQEGFYSKEQAFFSIEHSHKLSQIQRVYSYLSAYELAKSAFISDTQNLLLKS
HHHHHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WEYTLATLSDAHDSSTLNHIRIALGWDADDPHSLARIIQTFAQEEIEKTRDLIQQCEQTY
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEAHAQLDYVESRMRNPLNEQDNKILIMDHVRFRQEFNTALYDWNTAQEKAKKLCALPNF
HHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LLSFYTKTIPQYFRSSYDAFIQEFSHLYTDSPAGFRILFTHGRSHPNTWSSIYSINEFVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FLSEFFSSTEVDLLSKHGVLGLEKEVSALIHYIVSYIHKNSFQEAAITRILKRYNSTVPP
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
SVLDNLDKISHTPWVYVSGGTVVTLLKDYFENAEELTSIEKHPENAHELAAFFSDALKDL
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PYAIKSYLEDGAHSLIASSPTHVFSIIAGSPLFREAWNNDWYSYTWLRDVWVKNHQDFLT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHCCHHHHH
DTILNQQGIYTFIERFCTKYSLQNLAYDFHDFCSDHSLSLPELYEKASRFLKENFPKSEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ISALYQRHLAHQIVQDVPYTSDQQLPEVLDKLSSYLGISSRITYEKFDKLIHKYIPNFSL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
LSSGEIRHLFKGLVMESYQRLYFEEDIFLRLATAMRHHHLAYPAPLLFGDSNWAYSYFGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHH
ILHPGTQEIDLWQFNYAGLQGYPLENIDKLLSVTQPWILYANPIDYGMPPPPGYRSHMPK
EECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
GFF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA