| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is icfG [H]
Identifier: 62185533
GI number: 62185533
Start: 1089613
End: 1091520
Strand: Direct
Name: icfG [H]
Synonym: CAB933
Alternate gene names: 62185533
Gene position: 1089613-1091520 (Clockwise)
Preceding gene: 62185532
Following gene: 62185534
Centisome position: 95.21
GC content: 38.57
Gene sequence:
>1908_bases ATGATCCCTTTTACAAAAACAATAGGCTATCGTCTGTGGTTAGCATGCGTAGCAGCGATATTAATTCCCTTAGGGATGAA TATTGTTTTACTTAACCTTAGACAATACCATACTACAGTTTCATCAGTTGCCTTAGCATTTAAAGAAAATGCGACGTTTA AAGTGGATACTCTCATGCAAATTGTCCCACTGAATGCTGATGTTTTAGCCCTATTTTCAGAAGTCTTAGATCTCGATGAA GGCATTCCCTCCACCCCTAACGTTGAACTTAGCAACGAAATGCAAAGGACGTTTAGCGTATTATATGATGAGATTTCTTT AATTAAGTTGTTCCCCAACGGGGAGAAAATCGTTGTTGCCTCCAGCATTCCCCAACATCTTGGAGAAAATTACCAAAATA AAATAGATATTTCTGCCCAAACAGACTTTTCAGCAACATTCAAACAGTCTTCTAACAATCATGAAGTATTCTCTGTCATG CAGGCAAATATTTTTGACAATGAAACTCATGAACTTTTAGGGATCCTCTATACAACGCATAACATTGAAAAATTTCTTGA GGATATTCTTGTAAATACCCAAGCATACTTCAATGTAAAAACGGCTCTTTTATCTAAAGAAGGGATCATTTTAAAAGCAT CGGATCCAGATTTAAACTTACGTGCTATCTACCCTAACCTTACTGAAAAACAATTTTGTGACACTTTCATGGACAAAAGC ACCTGTCCAAAAAATATTTCTTTAAAGCCGATTCATCTCTCCCCATTATCTATAGAACCCAACTTTTTCGCTTTTAAAAA TGGGAAAAATGTAACATGGAGCTACCTTGCTCATGTTCCTAATATGGACCTGAGCGTACTTTCATACGGAATAAAAGCAG AGCTCTTTGCCACATTTTGGAAACGCACGTTAATCTATTTCGCTTATTTTCTATGTGTTGTATTAGGAAGTATGATTGCC TATCTTGTTGCGAAACGGCTCTCTCAGTCCATTCGCAAACTGGCCACAGTCATCATACAAACTAGAGACAACATCCACAC ACCCTATAAAGATGATTCTCTAGGGTTTGAGATCAATAGGCTAGGGCATATTTTTAACGCTATGGTGGAAAGTCTAAACC AACAACAAAGCCTGGCTGAAAAAAATTATGAAATAAAAGAAAGTGCTCAAAATGCGCTACATCTGGGAGAACAAGCACAA CAAAGACTCCTTCCTAATACGCTTCCTAATTATCCCCATACCGAACTAGCGAAAGCTTACATCCCAGCCATTACTGTAGG CGGGGATTTCTTCGATGTCTTCATCGTTGGCGAAGGAGACGATGCCAAACTATTTTTAATTGTTGCTGATGCTTCTGGGA AGGGTGTCCATGCTTGCGGATACTCCCTATTTCTTAAGAATATGCTGCGCTCGTTTCTGTCGCAGATGCCTTCAATAAAA GAAGCTATAAAACAAACTTCTTCGCTATTTTACCAAAATACTGCGGATTCAGGGATGTTTGTCACACTGTGTGTCTATAG CTACAATTACAAAACAGGAATTGTCGAGTTTTATTCCTGTGGGCACAATCCCGCATGTTATCTCTCTCCGGATGGCGCCG TTTCTTTCCTATCTCATCGTGGTATGGCTTTAGGATTTCTTCCCAACATTCCTGATATCCCTACAGGAAGCCTTAAACCC GATCCAGGATCCCTAATTATCTTGTATTCAGATGGAATTACAGAAGCTCATAATCAAGCTTTAGAAATGTTTGGAGAAGA ACGCCTGAAAAATGTTGTAAAAACTTTAGTAGGTAAAAGCGCAGAAGATGCTATGCATTCTTTAATACTCTCTGTGAAAA CCTTCGTAGGGAATTGCCATCAACACGATGATATTACCTTACTGATCCTTAAAATATCAGACTTATGA
Upstream 100 bases:
>100_bases CTTATATACTTAAAAAATAAAGAAAATAGGCAATAAAGAAGCATTTTTTGATCTCCATGATCTTCTAAAATGCTGTCTTG CAACTACAAATTTGATGTAG
Downstream 100 bases:
>100_bases AACAAACTTTTACCAAACGCATTTTGTTGTTTCTTTTTTTGGTAATTCCGATTCCTTTAATTTTGAATCTGGTCGTCCTC TCCCTATTTTCTTTTTCAGC
Product: regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MIPFTKTIGYRLWLACVAAILIPLGMNIVLLNLRQYHTTVSSVALAFKENATFKVDTLMQIVPLNADVLALFSEVLDLDE GIPSTPNVELSNEMQRTFSVLYDEISLIKLFPNGEKIVVASSIPQHLGENYQNKIDISAQTDFSATFKQSSNNHEVFSVM QANIFDNETHELLGILYTTHNIEKFLEDILVNTQAYFNVKTALLSKEGIILKASDPDLNLRAIYPNLTEKQFCDTFMDKS TCPKNISLKPIHLSPLSIEPNFFAFKNGKNVTWSYLAHVPNMDLSVLSYGIKAELFATFWKRTLIYFAYFLCVVLGSMIA YLVAKRLSQSIRKLATVIIQTRDNIHTPYKDDSLGFEINRLGHIFNAMVESLNQQQSLAEKNYEIKESAQNALHLGEQAQ QRLLPNTLPNYPHTELAKAYIPAITVGGDFFDVFIVGEGDDAKLFLIVADASGKGVHACGYSLFLKNMLRSFLSQMPSIK EAIKQTSSLFYQNTADSGMFVTLCVYSYNYKTGIVEFYSCGHNPACYLSPDGAVSFLSHRGMALGFLPNIPDIPTGSLKP DPGSLIILYSDGITEAHNQALEMFGEERLKNVVKTLVGKSAEDAMHSLILSVKTFVGNCHQHDDITLLILKISDL
Sequences:
>Translated_635_residues MIPFTKTIGYRLWLACVAAILIPLGMNIVLLNLRQYHTTVSSVALAFKENATFKVDTLMQIVPLNADVLALFSEVLDLDE GIPSTPNVELSNEMQRTFSVLYDEISLIKLFPNGEKIVVASSIPQHLGENYQNKIDISAQTDFSATFKQSSNNHEVFSVM QANIFDNETHELLGILYTTHNIEKFLEDILVNTQAYFNVKTALLSKEGIILKASDPDLNLRAIYPNLTEKQFCDTFMDKS TCPKNISLKPIHLSPLSIEPNFFAFKNGKNVTWSYLAHVPNMDLSVLSYGIKAELFATFWKRTLIYFAYFLCVVLGSMIA YLVAKRLSQSIRKLATVIIQTRDNIHTPYKDDSLGFEINRLGHIFNAMVESLNQQQSLAEKNYEIKESAQNALHLGEQAQ QRLLPNTLPNYPHTELAKAYIPAITVGGDFFDVFIVGEGDDAKLFLIVADASGKGVHACGYSLFLKNMLRSFLSQMPSIK EAIKQTSSLFYQNTADSGMFVTLCVYSYNYKTGIVEFYSCGHNPACYLSPDGAVSFLSHRGMALGFLPNIPDIPTGSLKP DPGSLIILYSDGITEAHNQALEMFGEERLKNVVKTLVGKSAEDAMHSLILSVKTFVGNCHQHDDITLLILKISDL >Mature_635_residues MIPFTKTIGYRLWLACVAAILIPLGMNIVLLNLRQYHTTVSSVALAFKENATFKVDTLMQIVPLNADVLALFSEVLDLDE GIPSTPNVELSNEMQRTFSVLYDEISLIKLFPNGEKIVVASSIPQHLGENYQNKIDISAQTDFSATFKQSSNNHEVFSVM QANIFDNETHELLGILYTTHNIEKFLEDILVNTQAYFNVKTALLSKEGIILKASDPDLNLRAIYPNLTEKQFCDTFMDKS TCPKNISLKPIHLSPLSIEPNFFAFKNGKNVTWSYLAHVPNMDLSVLSYGIKAELFATFWKRTLIYFAYFLCVVLGSMIA YLVAKRLSQSIRKLATVIIQTRDNIHTPYKDDSLGFEINRLGHIFNAMVESLNQQQSLAEKNYEIKESAQNALHLGEQAQ QRLLPNTLPNYPHTELAKAYIPAITVGGDFFDVFIVGEGDDAKLFLIVADASGKGVHACGYSLFLKNMLRSFLSQMPSIK EAIKQTSSLFYQNTADSGMFVTLCVYSYNYKTGIVEFYSCGHNPACYLSPDGAVSFLSHRGMALGFLPNIPDIPTGSLKP DPGSLIILYSDGITEAHNQALEMFGEERLKNVVKTLVGKSAEDAMHSLILSVKTFVGNCHQHDDITLLILKISDL
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 70819; Mature: 70819
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFTKTIGYRLWLACVAAILIPLGMNIVLLNLRQYHTTVSSVALAFKENATFKVDTLMQ CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHH IVPLNADVLALFSEVLDLDEGIPSTPNVELSNEMQRTFSVLYDEISLIKLFPNGEKIVVA HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCEEEEE SSIPQHLGENYQNKIDISAQTDFSATFKQSSNNHEVFSVMQANIFDNETHELLGILYTTH CCCHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH NIEKFLEDILVNTQAYFNVKTALLSKEGIILKASDPDLNLRAIYPNLTEKQFCDTFMDKS HHHHHHHHHHHCCHHHEEHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCC TCPKNISLKPIHLSPLSIEPNFFAFKNGKNVTWSYLAHVPNMDLSVLSYGIKAELFATFW CCCCCCCEEEEEECCEEECCCEEEEECCCCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHH KRTLIYFAYFLCVVLGSMIAYLVAKRLSQSIRKLATVIIQTRDNIHTPYKDDSLGFEINR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH LGHIFNAMVESLNQQQSLAEKNYEIKESAQNALHLGEQAQQRLLPNTLPNYPHTELAKAY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IPAITVGGDFFDVFIVGEGDDAKLFLIVADASGKGVHACGYSLFLKNMLRSFLSQMPSIK CCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH EAIKQTSSLFYQNTADSGMFVTLCVYSYNYKTGIVEFYSCGHNPACYLSPDGAVSFLSHR HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHECCCCCCEEEECCCCHHHHHHHC GMALGFLPNIPDIPTGSLKPDPGSLIILYSDGITEAHNQALEMFGEERLKNVVKTLVGKS CCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AEDAMHSLILSVKTFVGNCHQHDDITLLILKISDL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MIPFTKTIGYRLWLACVAAILIPLGMNIVLLNLRQYHTTVSSVALAFKENATFKVDTLMQ CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHH IVPLNADVLALFSEVLDLDEGIPSTPNVELSNEMQRTFSVLYDEISLIKLFPNGEKIVVA HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCEEEEE SSIPQHLGENYQNKIDISAQTDFSATFKQSSNNHEVFSVMQANIFDNETHELLGILYTTH CCCHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH NIEKFLEDILVNTQAYFNVKTALLSKEGIILKASDPDLNLRAIYPNLTEKQFCDTFMDKS HHHHHHHHHHHCCHHHEEHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCC TCPKNISLKPIHLSPLSIEPNFFAFKNGKNVTWSYLAHVPNMDLSVLSYGIKAELFATFW CCCCCCCEEEEEECCEEECCCEEEEECCCCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHH KRTLIYFAYFLCVVLGSMIAYLVAKRLSQSIRKLATVIIQTRDNIHTPYKDDSLGFEINR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH LGHIFNAMVESLNQQQSLAEKNYEIKESAQNALHLGEQAQQRLLPNTLPNYPHTELAKAY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IPAITVGGDFFDVFIVGEGDDAKLFLIVADASGKGVHACGYSLFLKNMLRSFLSQMPSIK CCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH EAIKQTSSLFYQNTADSGMFVTLCVYSYNYKTGIVEFYSCGHNPACYLSPDGAVSFLSHR HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHECCCCCCEEEECCCCHHHHHHHC GMALGFLPNIPDIPTGSLKPDPGSLIILYSDGITEAHNQALEMFGEERLKNVVKTLVGKS CCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AEDAMHSLILSVKTFVGNCHQHDDITLLILKISDL HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]