| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185529
Identifier: 62185529
GI number: 62185529
Start: 1084319
End: 1084873
Strand: Direct
Name: 62185529
Synonym: CAB929
Alternate gene names: NA
Gene position: 1084319-1084873 (Clockwise)
Preceding gene: 62185528
Following gene: 62185530
Centisome position: 94.75
GC content: 36.76
Gene sequence:
>555_bases ATGGCAGCAAAATCAAAAACACTGGAACTAGAAGATAATGTTTTTCTTATTCTTGAAGGAAATTTAAAAAGAATTTTCGC CACCGCGATTGGCTATACAACATTCCGAGAATTTCAAAATGTTGTTTTTAATTGCTCTAATGGCCAACAGGAAATAGCCA ATTTCTTTTTTGAAATGCTCATCAATGGGAAACTCATCCATGATCTTCCTGCAGAACAAAAACAAGCATCGCAAAGCTTA ATCGCCGAGTTCATGATGTTGATTCGTGTTGCTAAAGACGTTCACGAACGTGGTGAATTCATTAACTTCATCACATCGGA TATGCTCTCTCAGCAAGAACGTTGCGTGTTTTTAAATCGCTTGTCGAGAGTCGATGGTCAAGAATTTCTTATCATGACAG ACGTACAAAATACCTGCCATTTGATTCGCCATCTATTAGCACGACTTTTGGAAGCACAAAAGAATCCTGTAGGAGAAAAA AACCTCCTAGAAATTCAAGAAGATATCGTATCATTGAAGAATCACTTCGAAGAACTAGAAAAATCTCTTCAATAA
Upstream 100 bases:
>100_bases GCTCAGAATTGTCTACTGAGGATCAGGCTGCCCTTGAAAAATTGATAAAAAAGCTTCAAAAAGTTAAAAGTAATTTCATT CCCAATACAAAGGTCTAAAT
Downstream 100 bases:
>100_bases AATAAAATTCTATGAACAAAAAAACGCGCGTACTTACCGGTGATCGACCAACAGGCAAGCTCCATTTAGGTCACTGGGTA GGCTCTATAAAAAATCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAAKSKTLELEDNVFLILEGNLKRIFATAIGYTTFREFQNVVFNCSNGQQEIANFFFEMLINGKLIHDLPAEQKQASQSL IAEFMMLIRVAKDVHERGEFINFITSDMLSQQERCVFLNRLSRVDGQEFLIMTDVQNTCHLIRHLLARLLEAQKNPVGEK NLLEIQEDIVSLKNHFEELEKSLQ
Sequences:
>Translated_184_residues MAAKSKTLELEDNVFLILEGNLKRIFATAIGYTTFREFQNVVFNCSNGQQEIANFFFEMLINGKLIHDLPAEQKQASQSL IAEFMMLIRVAKDVHERGEFINFITSDMLSQQERCVFLNRLSRVDGQEFLIMTDVQNTCHLIRHLLARLLEAQKNPVGEK NLLEIQEDIVSLKNHFEELEKSLQ >Mature_183_residues AAKSKTLELEDNVFLILEGNLKRIFATAIGYTTFREFQNVVFNCSNGQQEIANFFFEMLINGKLIHDLPAEQKQASQSLI AEFMMLIRVAKDVHERGEFINFITSDMLSQQERCVFLNRLSRVDGQEFLIMTDVQNTCHLIRHLLARLLEAQKNPVGEKN LLEIQEDIVSLKNHFEELEKSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0803/CT_584/TC_0873 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21278; Mature: 21147
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKSKTLELEDNVFLILEGNLKRIFATAIGYTTFREFQNVVFNCSNGQQEIANFFFEML CCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH INGKLIHDLPAEQKQASQSLIAEFMMLIRVAKDVHERGEFINFITSDMLSQQERCVFLNR HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRVDGQEFLIMTDVQNTCHLIRHLLARLLEAQKNPVGEKNLLEIQEDIVSLKNHFEELE HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KSLQ HHCC >Mature Secondary Structure AAKSKTLELEDNVFLILEGNLKRIFATAIGYTTFREFQNVVFNCSNGQQEIANFFFEML CCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH INGKLIHDLPAEQKQASQSLIAEFMMLIRVAKDVHERGEFINFITSDMLSQQERCVFLNR HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRVDGQEFLIMTDVQNTCHLIRHLLARLLEAQKNPVGEKNLLEIQEDIVSLKNHFEELE HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KSLQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]