| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185528
Identifier: 62185528
GI number: 62185528
Start: 1083564
End: 1084316
Strand: Direct
Name: 62185528
Synonym: CAB928
Alternate gene names: NA
Gene position: 1083564-1084316 (Clockwise)
Preceding gene: 62185527
Following gene: 62185529
Centisome position: 94.69
GC content: 37.45
Gene sequence:
>753_bases ATGGGAAATTTAAAAACGTTGTTGGAGAGCCGTTTCAAAAAAAATACACAAGATAAAATGGAAACGCTTACACGCAAACG TATGGAAGGCGAGCACTCCCCTTTCTTAAGCAGATTTTCCGATGTAAAATTATCCCCACAAGAAGAAGAAAAATTCCGCC AGTTATTACAACATTACACGTTTGAAGATCAGATTTCCGAAGAAGATTTCAAAAGTCTTTGTAATCTCTCTGCCCAAATC AAACAAATCCACCATCAAGCAGTACTATTGCACGGCGAACGTATAAAAAAAGTACGTGATTTACTAAAAACTTACCGCGA AGGAGCTTTTTCATCTTGGTTACTACTTACCTATGGCAACCGTCAAACTCCTTACAATTTTCTTGTGTATTATGAACTCT TCTCTACTCTTCCTGAATCCCTGAAAATAGAAGCTGAGAAAATGCCAAGGCAAGCGATTTACACATTAGCCTCTCGCCAA GGTTCTCAAGAAAAAAAAGAAGCGATTATCCGAAATTACCGTGGAGAAAGTAAGGGAGAACTCCTAGATATTATCCGAAG GGAATTCCCTCTAATTTCTACAGATCGTCGTCAGATATGCTTAGCAAAACAAGCACTATCTCTGCTTTCCAAAGGCTCAG AATTATTAAGAAAATGCTCAGAATTGTCTACTGAGGATCAGGCTGCCCTTGAAAAATTGATAAAAAAGCTTCAAAAAGTT AAAAGTAATTTCATTCCCAATACAAAGGTCTAA
Upstream 100 bases:
>100_bases GGGAAACCTGTCTTTGCTACCGCGCCTTCAGCACGAGCTTCTGAAGATTACCTCAATTTAACCAAAGAATTGTTAATTTT ACTGAGGGATATGTAATCCT
Downstream 100 bases:
>100_bases ATATGGCAGCAAAATCAAAAACACTGGAACTAGAAGATAATGTTTTTCTTATTCTTGAAGGAAATTTAAAAAGAATTTTC GCCACCGCGATTGGCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MGNLKTLLESRFKKNTQDKMETLTRKRMEGEHSPFLSRFSDVKLSPQEEEKFRQLLQHYTFEDQISEEDFKSLCNLSAQI KQIHHQAVLLHGERIKKVRDLLKTYREGAFSSWLLLTYGNRQTPYNFLVYYELFSTLPESLKIEAEKMPRQAIYTLASRQ GSQEKKEAIIRNYRGESKGELLDIIRREFPLISTDRRQICLAKQALSLLSKGSELLRKCSELSTEDQAALEKLIKKLQKV KSNFIPNTKV
Sequences:
>Translated_250_residues MGNLKTLLESRFKKNTQDKMETLTRKRMEGEHSPFLSRFSDVKLSPQEEEKFRQLLQHYTFEDQISEEDFKSLCNLSAQI KQIHHQAVLLHGERIKKVRDLLKTYREGAFSSWLLLTYGNRQTPYNFLVYYELFSTLPESLKIEAEKMPRQAIYTLASRQ GSQEKKEAIIRNYRGESKGELLDIIRREFPLISTDRRQICLAKQALSLLSKGSELLRKCSELSTEDQAALEKLIKKLQKV KSNFIPNTKV >Mature_249_residues GNLKTLLESRFKKNTQDKMETLTRKRMEGEHSPFLSRFSDVKLSPQEEEKFRQLLQHYTFEDQISEEDFKSLCNLSAQIK QIHHQAVLLHGERIKKVRDLLKTYREGAFSSWLLLTYGNRQTPYNFLVYYELFSTLPESLKIEAEKMPRQAIYTLASRQG SQEKKEAIIRNYRGESKGELLDIIRREFPLISTDRRQICLAKQALSLLSKGSELLRKCSELSTEDQAALEKLIKKLQKVK SNFIPNTKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0137 (pGP6-D) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005350 [H]
Pfam domain/function: PF03677 UPF0137 [H]
EC number: NA
Molecular weight: Translated: 29249; Mature: 29118
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLKTLLESRFKKNTQDKMETLTRKRMEGEHSPFLSRFSDVKLSPQEEEKFRQLLQHYT CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC FEDQISEEDFKSLCNLSAQIKQIHHQAVLLHGERIKKVRDLLKTYREGAFSSWLLLTYGN CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECC RQTPYNFLVYYELFSTLPESLKIEAEKMPRQAIYTLASRQGSQEKKEAIIRNYRGESKGE CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH LLDIIRREFPLISTDRRQICLAKQALSLLSKGSELLRKCSELSTEDQAALEKLIKKLQKV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSNFIPNTKV HHHCCCCCCC >Mature Secondary Structure GNLKTLLESRFKKNTQDKMETLTRKRMEGEHSPFLSRFSDVKLSPQEEEKFRQLLQHYT CHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC FEDQISEEDFKSLCNLSAQIKQIHHQAVLLHGERIKKVRDLLKTYREGAFSSWLLLTYGN CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECC RQTPYNFLVYYELFSTLPESLKIEAEKMPRQAIYTLASRQGSQEKKEAIIRNYRGESKGE CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH LLDIIRREFPLISTDRRQICLAKQALSLLSKGSELLRKCSELSTEDQAALEKLIKKLQKV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSNFIPNTKV HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]