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The map label for this gene is sopA [C]

Identifier: 62185527

GI number: 62185527

Start: 1082792

End: 1083559

Strand: Direct

Name: sopA [C]

Synonym: CAB927

Alternate gene names: 62185527

Gene position: 1082792-1083559 (Clockwise)

Preceding gene: 62185526

Following gene: 62185528

Centisome position: 94.62

GC content: 42.32

Gene sequence:

>768_bases
ATGAAAACCATCGCTGTCAATAGCTTTAAAGGTGGAACAGCAAAAACATCGACAACCCTACATTTAGGTGCAGCTTTAGC
GCAATACCACAACGCTCGTGTGCTCCTTATTGATTTTGATGCTCAAGCAAACCTGACTTCAGGACTGGGTCTTGATCCCG
ATTGTTACGACAGCTTAGCTGTCGTACTTCAGGGTGAAAAAGATATTCGTGAAGTAATTCGTCCCATCGAAGATACAGGA
TTAGATTTAATTCCTGCCGACACTTGGTTAGAGCGTATAGAAGTTTCGGGGAATTTAGCCGCTGACCGTTATTCTCACGA
ACGGCTAAAACATATTCTCACCTCTGTAGAAAATGACTATGACTATGTGATCATTGACACCCCCCCCTCTTTATGCTGGC
TTACCGAATCTGCATTAATTGCAGCACAATATGCCTTAATTTGTGCCACTCCTGAGTTTTATAGTGTTAAGGGTCTAGAA
AGGTTGTCATCATTTATTCAAGGCATTTCGTCACGCCATCCCCTGAGTATCCTGGGAGTTGCTCTTTCCTTTTGGAACTA
TCGTGGTAAAAATAACGCCGCTTTTGCTGAGTTAATCCACAAGACATTCCCTGGAAGACTTTTAAATACTAAGATTCGTC
GAGACATTACGATTTCTGAAGCTGCTATCCACGGGAAACCTGTCTTTGCTACCGCGCCTTCAGCACGAGCTTCTGAAGAT
TACCTCAATTTAACCAAAGAATTGTTAATTTTACTGAGGGATATGTAA

Upstream 100 bases:

>100_bases
GACAGAGGACAAATTCCTAAATACTCTACTTGAAGAAAAGAACTCTTTAAGTTTAACTCCACTATTGTAGAAAACCCAGA
TCCAAGGACGAGCGTCTCCA

Downstream 100 bases:

>100_bases
TCCTATGGGAAATTTAAAAACGTTGTTGGAGAGCCGTTTCAAAAAAAATACACAAGATAAAATGGAAACGCTTACACGCA
AACGTATGGAAGGCGAGCAC

Product: putative chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKTIAVNSFKGGTAKTSTTLHLGAALAQYHNARVLLIDFDAQANLTSGLGLDPDCYDSLAVVLQGEKDIREVIRPIEDTG
LDLIPADTWLERIEVSGNLAADRYSHERLKHILTSVENDYDYVIIDTPPSLCWLTESALIAAQYALICATPEFYSVKGLE
RLSSFIQGISSRHPLSILGVALSFWNYRGKNNAAFAELIHKTFPGRLLNTKIRRDITISEAAIHGKPVFATAPSARASED
YLNLTKELLILLRDM

Sequences:

>Translated_255_residues
MKTIAVNSFKGGTAKTSTTLHLGAALAQYHNARVLLIDFDAQANLTSGLGLDPDCYDSLAVVLQGEKDIREVIRPIEDTG
LDLIPADTWLERIEVSGNLAADRYSHERLKHILTSVENDYDYVIIDTPPSLCWLTESALIAAQYALICATPEFYSVKGLE
RLSSFIQGISSRHPLSILGVALSFWNYRGKNNAAFAELIHKTFPGRLLNTKIRRDITISEAAIHGKPVFATAPSARASED
YLNLTKELLILLRDM
>Mature_255_residues
MKTIAVNSFKGGTAKTSTTLHLGAALAQYHNARVLLIDFDAQANLTSGLGLDPDCYDSLAVVLQGEKDIREVIRPIEDTG
LDLIPADTWLERIEVSGNLAADRYSHERLKHILTSVENDYDYVIIDTPPSLCWLTESALIAAQYALICATPEFYSVKGLE
RLSSFIQGISSRHPLSILGVALSFWNYRGKNNAAFAELIHKTFPGRLLNTKIRRDITISEAAIHGKPVFATAPSARASED
YLNLTKELLILLRDM

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28158; Mature: 28158

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIAVNSFKGGTAKTSTTLHLGAALAQYHNARVLLIDFDAQANLTSGLGLDPDCYDSLA
CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
VVLQGEKDIREVIRPIEDTGLDLIPADTWLERIEVSGNLAADRYSHERLKHILTSVENDY
EEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
DYVIIDTPPSLCWLTESALIAAQYALICATPEFYSVKGLERLSSFIQGISSRHPLSILGV
CEEEEECCCCEEEHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALSFWNYRGKNNAAFAELIHKTFPGRLLNTKIRRDITISEAAIHGKPVFATAPSARASED
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEEEHHHHCCCCCEEEECCCCCCCHH
YLNLTKELLILLRDM
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIAVNSFKGGTAKTSTTLHLGAALAQYHNARVLLIDFDAQANLTSGLGLDPDCYDSLA
CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
VVLQGEKDIREVIRPIEDTGLDLIPADTWLERIEVSGNLAADRYSHERLKHILTSVENDY
EEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
DYVIIDTPPSLCWLTESALIAAQYALICATPEFYSVKGLERLSSFIQGISSRHPLSILGV
CEEEEECCCCEEEHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALSFWNYRGKNNAAFAELIHKTFPGRLLNTKIRRDITISEAAIHGKPVFATAPSARASED
HHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEEEHHHHCCCCCEEEECCCCCCCHH
YLNLTKELLILLRDM
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]