| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185414
Identifier: 62185414
GI number: 62185414
Start: 938961
End: 939674
Strand: Direct
Name: 62185414
Synonym: CAB809
Alternate gene names: NA
Gene position: 938961-939674 (Clockwise)
Preceding gene: 62185411
Following gene: 62185415
Centisome position: 82.05
GC content: 37.54
Gene sequence:
>714_bases ATGACTCATCCTGATATTTCTTCTATTTTGCAAGAAATAATAGATCGCTATTCAGAGTACTATTATCCTTCTCTATCACA ACTTATTCCTCTAACTTTCCCATGCGGACACAGCCCGGCTCCTATAAAAGCTTCTGTGGTACAAGAAAAACGTATGGCAC AACCGCTTGTTGCTGATAAAAAATTAGACAAGCCTTTATCCAATCCAGTTCAAGATAGTGAAGCCCCTCCTCCCCTACCT ATGGCTCACGAGCGCTTAAAAAAATCTTCCTGGGAGTGCGTTCCTCTCCCTCCTGATCTTTCCAGAGAAGAAATCTTGAA GTTTCGCTATTCTACTTTGCAAGCACATTGTTTAAAAACACCTTTGGATATACCTTGTGGGATCTTCGTAGATGAAGAAA AAGATGAGGAAATTTTATTTTTTAATAGATTATCAAAAATTCTTACTCAACAAATTTTCCCTTCTCGGCTCATTTTATCC ACAAGTCATAAAGAGATTTTTCATAAAAATACGGGGCTGTCTTTATGTCTAGCACCTTTAACAATGATGCGTTATAAGAT CCCCAATGTACGTTATCATCAATCTTTCGTGAAAGATGGGTGCACTTGGATTCCTATTTATTCTTCAGTATACTATGAAA ATGATCCGCAATTGAAACGAGATCTATGGGTAATATTGAATCAACTACCTTTCGCCTATACGCAGAAGTCATAG
Upstream 100 bases:
>100_bases AAAAGCCAAGGAGATTTTCACATCGGAGAACTAAAGAGCATAGATGAATAAACCATCTATATCTATAGTGAATCCTTAGA TATCTTTGCTATGTATATAT
Downstream 100 bases:
>100_bases TAAACTCCAATATCAATCAGGTATTAGACTACGGGCTCCCTCATCATCTCGAGCACATTACTAAGGGTACTGGTGTTAGC GTTTCCTTACGGGGAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTHPDISSILQEIIDRYSEYYYPSLSQLIPLTFPCGHSPAPIKASVVQEKRMAQPLVADKKLDKPLSNPVQDSEAPPPLP MAHERLKKSSWECVPLPPDLSREEILKFRYSTLQAHCLKTPLDIPCGIFVDEEKDEEILFFNRLSKILTQQIFPSRLILS TSHKEIFHKNTGLSLCLAPLTMMRYKIPNVRYHQSFVKDGCTWIPIYSSVYYENDPQLKRDLWVILNQLPFAYTQKS
Sequences:
>Translated_237_residues MTHPDISSILQEIIDRYSEYYYPSLSQLIPLTFPCGHSPAPIKASVVQEKRMAQPLVADKKLDKPLSNPVQDSEAPPPLP MAHERLKKSSWECVPLPPDLSREEILKFRYSTLQAHCLKTPLDIPCGIFVDEEKDEEILFFNRLSKILTQQIFPSRLILS TSHKEIFHKNTGLSLCLAPLTMMRYKIPNVRYHQSFVKDGCTWIPIYSSVYYENDPQLKRDLWVILNQLPFAYTQKS >Mature_236_residues THPDISSILQEIIDRYSEYYYPSLSQLIPLTFPCGHSPAPIKASVVQEKRMAQPLVADKKLDKPLSNPVQDSEAPPPLPM AHERLKKSSWECVPLPPDLSREEILKFRYSTLQAHCLKTPLDIPCGIFVDEEKDEEILFFNRLSKILTQQIFPSRLILST SHKEIFHKNTGLSLCLAPLTMMRYKIPNVRYHQSFVKDGCTWIPIYSSVYYENDPQLKRDLWVILNQLPFAYTQKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27405; Mature: 27274
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPDISSILQEIIDRYSEYYYPSLSQLIPLTFPCGHSPAPIKASVVQEKRMAQPLVADK CCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHH KLDKPLSNPVQDSEAPPPLPMAHERLKKSSWECVPLPPDLSREEILKFRYSTLQAHCLKT HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCC PLDIPCGIFVDEEKDEEILFFNRLSKILTQQIFPSRLILSTSHKEIFHKNTGLSLCLAPL CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHCCCCHHHHHHHH TMMRYKIPNVRYHQSFVKDGCTWIPIYSSVYYENDPQLKRDLWVILNQLPFAYTQKS HHHHHCCCCCHHHHHHHHCCCEEEEEHHEEEECCCCHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure THPDISSILQEIIDRYSEYYYPSLSQLIPLTFPCGHSPAPIKASVVQEKRMAQPLVADK CCCCHHHHHHHHHHHHHHHCCCCHHHHCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHH KLDKPLSNPVQDSEAPPPLPMAHERLKKSSWECVPLPPDLSREEILKFRYSTLQAHCLKT HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCC PLDIPCGIFVDEEKDEEILFFNRLSKILTQQIFPSRLILSTSHKEIFHKNTGLSLCLAPL CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHCCCCHHHHHHHH TMMRYKIPNVRYHQSFVKDGCTWIPIYSSVYYENDPQLKRDLWVILNQLPFAYTQKS HHHHHCCCCCHHHHHHHHCCCEEEEEHHEEEECCCCHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA