| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185380
Identifier: 62185380
GI number: 62185380
Start: 898177
End: 899478
Strand: Direct
Name: 62185380
Synonym: CAB775
Alternate gene names: NA
Gene position: 898177-899478 (Clockwise)
Preceding gene: 62185379
Following gene: 62185385
Centisome position: 78.49
GC content: 40.17
Gene sequence:
>1302_bases ATGAGCGTGTTCCTTAACCCAAGCAACTCACAGCCGACACCATCTGATCCTCCTCCCCTATCGTGTTGCCAACATATCAC TTCTTACATAAAAGAGGTGAACTACTGTTCCTTATTCTCAACCATCTTCTCAAAAATCATCTCCACTGAGGATCTCGAAC ACATAGAATCTTTCTTGGGTTACCTCGCTATTACCCTAGCCTGCCTTACCTCTGCCCTGATTTCTCTAGTACTTTACGTA CTACTGATTCCAGTGAAATTCGTGGTTGCTGCGATCACGCTTCCCTACTGTGGACATACCCAGGAAACCTCTTTACTTCC CGACCCTCCCAAGGTTCTTCTACCCTTAACGGAAACCCAAGAGGCTTTTGTTGAAGAAATAAAACGATCTATGCTCGGAA ATCTAACCCATGCATTTGAAATAAATATATCCGAGGATATCTTATCCCTAGCTCCTATACCTTCGCCATTTTTAACTTCA TTAGAGACAGCATCTTGTGAAAGAATTTCGTGTAACTACAAAAAGTTAATACGACTAATTCATCACTTGCATTGCTGGGA TTCTGGTTGGGAGACCATCATGGATTATCTTACTATTGAATTATCCGAAGATCCTTCTCATCCCGATGCTGAGACATTTC CTATCATGATGCACCACCTTATTCTAGCTCTGGAAGATCGCACGATTTCCAAAGAGAAAAAACGCTCTGCTCTTAATGAA ATTTCTTCGTATGCAAATATGTGCCGACCGACTTGGGGTGAAACAATTTTCAGGTCTATCAATCATCTGTATAATACAAG AAATTCTGGAAGAGATCAGATACTCTTGTGGCTGCAAATGTTTAAAGAACACTTGCTCACACAACAACAACTCGTTGCAC ATGAAGAGGAATGGCATCAAATTAATGGCTTAAAACATATCTATGGGAAACAACTTGGCTTAGCCACTCATCATCTAAAT CAGAATCTTGCTGGTCTAACCCTAAGACAAACCTCGTTGCTGCCTCAGAATATAGAAAAATACAAGGCTCTTAAACATAG TTTCGAACAAGCCTATACAGCATCGTATTCTCCACTTGTATCCTATCTACACAATGCATTTATAACATCAACACCAGAAA TACAAGCGTACATTTATAACTACCTACTGGATATAGTAGCCAACACGATCAATCTTCCTGAAACAGGAGCTCACATTGAT GTTGTACTTGAGTGTTTCTATAATGAAAATTATGAACTCAAACCCGAAGGAATCATCTACCTACTCTACATCATGGACAT CATAATTCCTCAGAGCACCTAG
Upstream 100 bases:
>100_bases TTAAAGTACTTCACTAACAAAGTTTGGGTTAGCATCAAATTAATCGATAATAGGGTATTAAAAACCTTAAATTATTTTTA ACATTTAGAGAATACCCCCT
Downstream 100 bases:
>100_bases AACAGTCAGACTAAACAATAAAAAAAGCGCTGTGAGAGATTTCACAACGCTTTTTTGCTTTTACAGATCTTAAACAATAC GCCTTAGAAGATCAAACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSVFLNPSNSQPTPSDPPPLSCCQHITSYIKEVNYCSLFSTIFSKIISTEDLEHIESFLGYLAITLACLTSALISLVLYV LLIPVKFVVAAITLPYCGHTQETSLLPDPPKVLLPLTETQEAFVEEIKRSMLGNLTHAFEINISEDILSLAPIPSPFLTS LETASCERISCNYKKLIRLIHHLHCWDSGWETIMDYLTIELSEDPSHPDAETFPIMMHHLILALEDRTISKEKKRSALNE ISSYANMCRPTWGETIFRSINHLYNTRNSGRDQILLWLQMFKEHLLTQQQLVAHEEEWHQINGLKHIYGKQLGLATHHLN QNLAGLTLRQTSLLPQNIEKYKALKHSFEQAYTASYSPLVSYLHNAFITSTPEIQAYIYNYLLDIVANTINLPETGAHID VVLECFYNENYELKPEGIIYLLYIMDIIIPQST
Sequences:
>Translated_433_residues MSVFLNPSNSQPTPSDPPPLSCCQHITSYIKEVNYCSLFSTIFSKIISTEDLEHIESFLGYLAITLACLTSALISLVLYV LLIPVKFVVAAITLPYCGHTQETSLLPDPPKVLLPLTETQEAFVEEIKRSMLGNLTHAFEINISEDILSLAPIPSPFLTS LETASCERISCNYKKLIRLIHHLHCWDSGWETIMDYLTIELSEDPSHPDAETFPIMMHHLILALEDRTISKEKKRSALNE ISSYANMCRPTWGETIFRSINHLYNTRNSGRDQILLWLQMFKEHLLTQQQLVAHEEEWHQINGLKHIYGKQLGLATHHLN QNLAGLTLRQTSLLPQNIEKYKALKHSFEQAYTASYSPLVSYLHNAFITSTPEIQAYIYNYLLDIVANTINLPETGAHID VVLECFYNENYELKPEGIIYLLYIMDIIIPQST >Mature_432_residues SVFLNPSNSQPTPSDPPPLSCCQHITSYIKEVNYCSLFSTIFSKIISTEDLEHIESFLGYLAITLACLTSALISLVLYVL LIPVKFVVAAITLPYCGHTQETSLLPDPPKVLLPLTETQEAFVEEIKRSMLGNLTHAFEINISEDILSLAPIPSPFLTSL ETASCERISCNYKKLIRLIHHLHCWDSGWETIMDYLTIELSEDPSHPDAETFPIMMHHLILALEDRTISKEKKRSALNEI SSYANMCRPTWGETIFRSINHLYNTRNSGRDQILLWLQMFKEHLLTQQQLVAHEEEWHQINGLKHIYGKQLGLATHHLNQ NLAGLTLRQTSLLPQNIEKYKALKHSFEQAYTASYSPLVSYLHNAFITSTPEIQAYIYNYLLDIVANTINLPETGAHIDV VLECFYNENYELKPEGIIYLLYIMDIIIPQST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49366; Mature: 49235
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFLNPSNSQPTPSDPPPLSCCQHITSYIKEVNYCSLFSTIFSKIISTEDLEHIESFLG CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH YLAITLACLTSALISLVLYVLLIPVKFVVAAITLPYCGHTQETSLLPDPPKVLLPLTETQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHH EAFVEEIKRSMLGNLTHAFEINISEDILSLAPIPSPFLTSLETASCERISCNYKKLIRLI HHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHH HHLHCWDSGWETIMDYLTIELSEDPSHPDAETFPIMMHHLILALEDRTISKEKKRSALNE HHHHHCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ISSYANMCRPTWGETIFRSINHLYNTRNSGRDQILLWLQMFKEHLLTQQQLVAHEEEWHQ HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INGLKHIYGKQLGLATHHLNQNLAGLTLRQTSLLPQNIEKYKALKHSFEQAYTASYSPLV HCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH SYLHNAFITSTPEIQAYIYNYLLDIVANTINLPETGAHIDVVLECFYNENYELKPEGIIY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHH LLYIMDIIIPQST HHHHHHHHCCCCC >Mature Secondary Structure SVFLNPSNSQPTPSDPPPLSCCQHITSYIKEVNYCSLFSTIFSKIISTEDLEHIESFLG EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH YLAITLACLTSALISLVLYVLLIPVKFVVAAITLPYCGHTQETSLLPDPPKVLLPLTETQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHH EAFVEEIKRSMLGNLTHAFEINISEDILSLAPIPSPFLTSLETASCERISCNYKKLIRLI HHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHH HHLHCWDSGWETIMDYLTIELSEDPSHPDAETFPIMMHHLILALEDRTISKEKKRSALNE HHHHHCCCHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ISSYANMCRPTWGETIFRSINHLYNTRNSGRDQILLWLQMFKEHLLTQQQLVAHEEEWHQ HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INGLKHIYGKQLGLATHHLNQNLAGLTLRQTSLLPQNIEKYKALKHSFEQAYTASYSPLV HCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH SYLHNAFITSTPEIQAYIYNYLLDIVANTINLPETGAHIDVVLECFYNENYELKPEGIIY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHH LLYIMDIIIPQST HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA