| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185379
Identifier: 62185379
GI number: 62185379
Start: 894981
End: 897803
Strand: Direct
Name: 62185379
Synonym: CAB774
Alternate gene names: NA
Gene position: 894981-897803 (Clockwise)
Preceding gene: 62185378
Following gene: 62185380
Centisome position: 78.21
GC content: 42.72
Gene sequence:
>2823_bases ATGTCACTAGACAACAATAATTTCCGGGCAGCTTTTGCATACCCACAACCTGCTTCAGCACTGCACGGAACCTCTCTAAT AAAAACCGTTAATCAAAAGATTTCTTTCCTATCCATATTTAATGCGTTAGGAAATAAAATCGGTTCTTGTCTTTGTTTGC ATCCAGAGCCTGATTCTAAAGCCGGATGGGTCTTTACCTTTGTTTTATCTGCTATTATTACAGTTCTGCTCTGTATTATT CTTCTCCCTGTGAAGTTAATCCTTCTAGGATTAAGTTGCTGCCCCTGCTTATCTAAACCTACCACAGGGGTGGAGGCACC TGAAGTGCCATCTTCTTCAAGACCTCCAATTCCCCCAGCAGGAGAGGCGGGTGCTTTTTCTCAACCTCCTGTAGGATTAG ATCCATCTAGATTTTCGCCGGATTCGTTTATTCCTGCGCCTCCACTCAGTCCAACCTCAATGCCATCCGCAGGAGGCGTA GTGTCTCCAGGAATGACCCTTAGAGAGTTCTTGCAAACAAACTACCCTACAGTCGACTTAAACACCGTTACCCTAGACAG TTTAGGAATTCCCCTTTTATTAACATTAGACGATCTCCCTGAAGGAACTACTCTTCTTGATCTTCCCATGTCTCTACTTT TCGAAGAAGGTAATCGCGACCTATCTCAACTCCCCCTATTCCAAAGCCATACGGCTGACTCGTCTCCTATATCTTTAACT GGTTCTTTATCTTCACTTCTAGCACCCTTAGAAGAAGATCTAGAAGATTCTCAAGATCAGGGTGGCAGAACTACTGCACC AACTTCTCTAATTGTGGATACACCTGCAGCCATTCCTGCTGTAGAAGTTAACCAACAACTCTCTAGTAGAGAATTGTTAA ATAGTTTGTATCCCAATATGGATCACACAAGATTCATGAACAGTGCGCGTGTAAACCTAAGACTTCAAGGCATTCCTGGA CCTCTCAGTGACGATGATGTTCTTAATCTTCCTGCAATCATTGCCTTCCCCGATCTAGTTGCTGGACAGCCCGCGCGTCC TACCTCCTTAACTCTCACTGACACACCAGCATCCCTGGCTTCTGTACAAGAAGAACCTACTGCGCCCCCGCCTAGTGAAG AATTAATTTCTCCTAGTGACCCCCGATATACTTTCCTACAGAACCACTTTCCTGAACTAGAACCTGAATACTACAGCAGA CACATTAGTTTACTAGCTTCACTTTCTGGTGTGGACGAAGGAAGCTTCAATCTTCTTGAATTACCTTTGGAAGCATTTAT TTATACGCAACCTATTCTAGATTACGAGCCGATTCCTTCAGAGCATTTGCAAGAAAGATTAGGAGAGGTCTCTCCCGAAG AAGATGTACGAAGAAATAACGAGTTTATTGATAATCTCCTAGAAAATACACCCTATCGCTGGACTTTTCTAAATCGACTA AGAAGCAATATTACTAACTCTACTCAAAGTGCAGACTTGCGTAGACAGTGGTTCTCAATAATAGACATGATCGTTAATAA GAGCAGTCCGGAACTTGAAATCGAAGATATCAGCAATACTGCTCGTGCATACCTGTTCAGAATTCATAATATTTTAAAAA ATCCTGAGATTCCTACTGAAAGAAAATCAGAGATGTTAAAATACATAGCCTCTCATTATGATCCGAATTCTGTGGCAATG TGTTTAGCAGCCATGCAACAAGAAATCGCTTTACAAAATGAGATAACCCCTGAGTTAGCTAGTGTCGAGGCAGAGATGGG AGCCAATGGCGTCAGCTCATCTATTAGTCAAATTCTTCCTCCTCTAGCCTCTCAAGCCACTCCTCAAGAAGTAGACGGAT ACATCCAACTGTTAAAAAGCCTTCTATCAGGCCCTATGCTCACAAATGAGGATAACATCCACTTGGCTCCAGCTAATGAT ATCTATCTAGAGTCATTGATGAGAGATGTACCCAACAGTTGGGGACCCATCCATCGACCACTACAAAATCGCATCAGACG ACTTCTAGAGGCTGAGGACAACCGTATTCTTCAACAAGTACAAAACCGCGCAACTCAAACTGCACGATTGGCACAGAACC AACGGATACGCGATAATTGGAATAGCATATTGCTTGCTCTATCCGATGGTAGAGAGGGATCAGTTGCTTCCGACGAGGCC CAAGCTCTTTCCCGCTCTACAATGTATCAAGTGCTTCAACTTATCGATAATCCTAACATACCGCACGACAAAAAATTCTC AGTTATCAGCAACGTAGCCTCATACAGTGATCGGTGTCCTCCCACTTGGGTCCGAGTTGCCGGCCAGGAGTTACAAGCTA TCTTTAATACTAACGATGAGACAGCAAATATTGTGCTTGTTTGGGCGCAAATATTTAAGGAAGGGCTTTTATCAGAAATT TTCAGAAACCAACGAGAATGGCATATGATGACAGCCTTTAAGATCATTCGCGGTTCTGAATTGGGATTAGACAATGTGGG TATTATTCTAGACCCGTATACAACCGCGCTAACTGGTCGTCACTACACTAATCAGCATAACCAATATTTCGCACAATTCC TAAATGTTTACCGAAATAGTGGTAACAACTTGATTAATTCTGCTCTAGAACAGTCTCTTGGAGGTTCTGAAGATCAGATA CAAGCTCTAACCAATACGATCTTAGCAGACTTAACAGCTGCAGGTATTCCTGAAGCACATCGCGCTCAAATTATGGAGGA AATCTTCTTCCCGGAAGAAAATGACTACAAACCTTCGAGAGAAGCTATCTGTTATTTACTACTTAAAGAAGGTGTGATTA TGACTCAAGACCACAACCAGTAA
Upstream 100 bases:
>100_bases CACAGGTTCTTCTAAAATGTTTTAGCTTTTCATAAAAAAGCACGAAAATAGACCCTTTTAGGGAGAATTTTTTGGCTTAT TTTCATTCAGGTAAATTTTT
Downstream 100 bases:
>100_bases ATATGAAAATCGTTCAATACATATCTTCTTGAAGCTAAGGCAACATAGCCCCACAGTTGTGTTGCCTCTATCTTTTAACC GAAACAAAAAATAACACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 940; Mature: 939
Protein sequence:
>940_residues MSLDNNNFRAAFAYPQPASALHGTSLIKTVNQKISFLSIFNALGNKIGSCLCLHPEPDSKAGWVFTFVLSAIITVLLCII LLPVKLILLGLSCCPCLSKPTTGVEAPEVPSSSRPPIPPAGEAGAFSQPPVGLDPSRFSPDSFIPAPPLSPTSMPSAGGV VSPGMTLREFLQTNYPTVDLNTVTLDSLGIPLLLTLDDLPEGTTLLDLPMSLLFEEGNRDLSQLPLFQSHTADSSPISLT GSLSSLLAPLEEDLEDSQDQGGRTTAPTSLIVDTPAAIPAVEVNQQLSSRELLNSLYPNMDHTRFMNSARVNLRLQGIPG PLSDDDVLNLPAIIAFPDLVAGQPARPTSLTLTDTPASLASVQEEPTAPPPSEELISPSDPRYTFLQNHFPELEPEYYSR HISLLASLSGVDEGSFNLLELPLEAFIYTQPILDYEPIPSEHLQERLGEVSPEEDVRRNNEFIDNLLENTPYRWTFLNRL RSNITNSTQSADLRRQWFSIIDMIVNKSSPELEIEDISNTARAYLFRIHNILKNPEIPTERKSEMLKYIASHYDPNSVAM CLAAMQQEIALQNEITPELASVEAEMGANGVSSSISQILPPLASQATPQEVDGYIQLLKSLLSGPMLTNEDNIHLAPAND IYLESLMRDVPNSWGPIHRPLQNRIRRLLEAEDNRILQQVQNRATQTARLAQNQRIRDNWNSILLALSDGREGSVASDEA QALSRSTMYQVLQLIDNPNIPHDKKFSVISNVASYSDRCPPTWVRVAGQELQAIFNTNDETANIVLVWAQIFKEGLLSEI FRNQREWHMMTAFKIIRGSELGLDNVGIILDPYTTALTGRHYTNQHNQYFAQFLNVYRNSGNNLINSALEQSLGGSEDQI QALTNTILADLTAAGIPEAHRAQIMEEIFFPEENDYKPSREAICYLLLKEGVIMTQDHNQ
Sequences:
>Translated_940_residues MSLDNNNFRAAFAYPQPASALHGTSLIKTVNQKISFLSIFNALGNKIGSCLCLHPEPDSKAGWVFTFVLSAIITVLLCII LLPVKLILLGLSCCPCLSKPTTGVEAPEVPSSSRPPIPPAGEAGAFSQPPVGLDPSRFSPDSFIPAPPLSPTSMPSAGGV VSPGMTLREFLQTNYPTVDLNTVTLDSLGIPLLLTLDDLPEGTTLLDLPMSLLFEEGNRDLSQLPLFQSHTADSSPISLT GSLSSLLAPLEEDLEDSQDQGGRTTAPTSLIVDTPAAIPAVEVNQQLSSRELLNSLYPNMDHTRFMNSARVNLRLQGIPG PLSDDDVLNLPAIIAFPDLVAGQPARPTSLTLTDTPASLASVQEEPTAPPPSEELISPSDPRYTFLQNHFPELEPEYYSR HISLLASLSGVDEGSFNLLELPLEAFIYTQPILDYEPIPSEHLQERLGEVSPEEDVRRNNEFIDNLLENTPYRWTFLNRL RSNITNSTQSADLRRQWFSIIDMIVNKSSPELEIEDISNTARAYLFRIHNILKNPEIPTERKSEMLKYIASHYDPNSVAM CLAAMQQEIALQNEITPELASVEAEMGANGVSSSISQILPPLASQATPQEVDGYIQLLKSLLSGPMLTNEDNIHLAPAND IYLESLMRDVPNSWGPIHRPLQNRIRRLLEAEDNRILQQVQNRATQTARLAQNQRIRDNWNSILLALSDGREGSVASDEA QALSRSTMYQVLQLIDNPNIPHDKKFSVISNVASYSDRCPPTWVRVAGQELQAIFNTNDETANIVLVWAQIFKEGLLSEI FRNQREWHMMTAFKIIRGSELGLDNVGIILDPYTTALTGRHYTNQHNQYFAQFLNVYRNSGNNLINSALEQSLGGSEDQI QALTNTILADLTAAGIPEAHRAQIMEEIFFPEENDYKPSREAICYLLLKEGVIMTQDHNQ >Mature_939_residues SLDNNNFRAAFAYPQPASALHGTSLIKTVNQKISFLSIFNALGNKIGSCLCLHPEPDSKAGWVFTFVLSAIITVLLCIIL LPVKLILLGLSCCPCLSKPTTGVEAPEVPSSSRPPIPPAGEAGAFSQPPVGLDPSRFSPDSFIPAPPLSPTSMPSAGGVV SPGMTLREFLQTNYPTVDLNTVTLDSLGIPLLLTLDDLPEGTTLLDLPMSLLFEEGNRDLSQLPLFQSHTADSSPISLTG SLSSLLAPLEEDLEDSQDQGGRTTAPTSLIVDTPAAIPAVEVNQQLSSRELLNSLYPNMDHTRFMNSARVNLRLQGIPGP LSDDDVLNLPAIIAFPDLVAGQPARPTSLTLTDTPASLASVQEEPTAPPPSEELISPSDPRYTFLQNHFPELEPEYYSRH ISLLASLSGVDEGSFNLLELPLEAFIYTQPILDYEPIPSEHLQERLGEVSPEEDVRRNNEFIDNLLENTPYRWTFLNRLR SNITNSTQSADLRRQWFSIIDMIVNKSSPELEIEDISNTARAYLFRIHNILKNPEIPTERKSEMLKYIASHYDPNSVAMC LAAMQQEIALQNEITPELASVEAEMGANGVSSSISQILPPLASQATPQEVDGYIQLLKSLLSGPMLTNEDNIHLAPANDI YLESLMRDVPNSWGPIHRPLQNRIRRLLEAEDNRILQQVQNRATQTARLAQNQRIRDNWNSILLALSDGREGSVASDEAQ ALSRSTMYQVLQLIDNPNIPHDKKFSVISNVASYSDRCPPTWVRVAGQELQAIFNTNDETANIVLVWAQIFKEGLLSEIF RNQREWHMMTAFKIIRGSELGLDNVGIILDPYTTALTGRHYTNQHNQYFAQFLNVYRNSGNNLINSALEQSLGGSEDQIQ ALTNTILADLTAAGIPEAHRAQIMEEIFFPEENDYKPSREAICYLLLKEGVIMTQDHNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103876; Mature: 103744
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDNNNFRAAFAYPQPASALHGTSLIKTVNQKISFLSIFNALGNKIGSCLCLHPEPDSK CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC AGWVFTFVLSAIITVLLCIILLPVKLILLGLSCCPCLSKPTTGVEAPEVPSSSRPPIPPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEAGAFSQPPVGLDPSRFSPDSFIPAPPLSPTSMPSAGGVVSPGMTLREFLQTNYPTVDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE NTVTLDSLGIPLLLTLDDLPEGTTLLDLPMSLLFEEGNRDLSQLPLFQSHTADSSPISLT EEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCEEEC GSLSSLLAPLEEDLEDSQDQGGRTTAPTSLIVDTPAAIPAVEVNQQLSSRELLNSLYPNM CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC DHTRFMNSARVNLRLQGIPGPLSDDDVLNLPAIIAFPDLVAGQPARPTSLTLTDTPASLA CHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEEEECCCHHHH SVQEEPTAPPPSEELISPSDPRYTFLQNHFPELEPEYYSRHISLLASLSGVDEGSFNLLE HHHHCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH LPLEAFIYTQPILDYEPIPSEHLQERLGEVSPEEDVRRNNEFIDNLLENTPYRWTFLNRL HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH RSNITNSTQSADLRRQWFSIIDMIVNKSSPELEIEDISNTARAYLFRIHNILKNPEIPTE HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCH RKSEMLKYIASHYDPNSVAMCLAAMQQEIALQNEITPELASVEAEMGANGVSSSISQILP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHC PLASQATPQEVDGYIQLLKSLLSGPMLTNEDNIHLAPANDIYLESLMRDVPNSWGPIHRP HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHH LQNRIRRLLEAEDNRILQQVQNRATQTARLAQNQRIRDNWNSILLALSDGREGSVASDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCHHH QALSRSTMYQVLQLIDNPNIPHDKKFSVISNVASYSDRCPPTWVRVAGQELQAIFNTNDE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC TANIVLVWAQIFKEGLLSEIFRNQREWHMMTAFKIIRGSELGLDNVGIILDPYTTALTGR CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCC HYTNQHNQYFAQFLNVYRNSGNNLINSALEQSLGGSEDQIQALTNTILADLTAAGIPEAH CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH RAQIMEEIFFPEENDYKPSREAICYLLLKEGVIMTQDHNQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC >Mature Secondary Structure SLDNNNFRAAFAYPQPASALHGTSLIKTVNQKISFLSIFNALGNKIGSCLCLHPEPDSK CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC AGWVFTFVLSAIITVLLCIILLPVKLILLGLSCCPCLSKPTTGVEAPEVPSSSRPPIPPA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEAGAFSQPPVGLDPSRFSPDSFIPAPPLSPTSMPSAGGVVSPGMTLREFLQTNYPTVDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE NTVTLDSLGIPLLLTLDDLPEGTTLLDLPMSLLFEEGNRDLSQLPLFQSHTADSSPISLT EEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCEEEC GSLSSLLAPLEEDLEDSQDQGGRTTAPTSLIVDTPAAIPAVEVNQQLSSRELLNSLYPNM CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC DHTRFMNSARVNLRLQGIPGPLSDDDVLNLPAIIAFPDLVAGQPARPTSLTLTDTPASLA CHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEEEECCCHHHH SVQEEPTAPPPSEELISPSDPRYTFLQNHFPELEPEYYSRHISLLASLSGVDEGSFNLLE HHHHCCCCCCCHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH LPLEAFIYTQPILDYEPIPSEHLQERLGEVSPEEDVRRNNEFIDNLLENTPYRWTFLNRL HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH RSNITNSTQSADLRRQWFSIIDMIVNKSSPELEIEDISNTARAYLFRIHNILKNPEIPTE HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCH RKSEMLKYIASHYDPNSVAMCLAAMQQEIALQNEITPELASVEAEMGANGVSSSISQILP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHC PLASQATPQEVDGYIQLLKSLLSGPMLTNEDNIHLAPANDIYLESLMRDVPNSWGPIHRP HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHH LQNRIRRLLEAEDNRILQQVQNRATQTARLAQNQRIRDNWNSILLALSDGREGSVASDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCHHH QALSRSTMYQVLQLIDNPNIPHDKKFSVISNVASYSDRCPPTWVRVAGQELQAIFNTNDE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC TANIVLVWAQIFKEGLLSEIFRNQREWHMMTAFKIIRGSELGLDNVGIILDPYTTALTGR CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCC HYTNQHNQYFAQFLNVYRNSGNNLINSALEQSLGGSEDQIQALTNTILADLTAAGIPEAH CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHH RAQIMEEIFFPEENDYKPSREAICYLLLKEGVIMTQDHNQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA