| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185319
Identifier: 62185319
GI number: 62185319
Start: 816999
End: 818444
Strand: Direct
Name: 62185319
Synonym: CAB706
Alternate gene names: NA
Gene position: 816999-818444 (Clockwise)
Preceding gene: 62185317
Following gene: 62185320
Centisome position: 71.39
GC content: 41.84
Gene sequence:
>1446_bases ATGAATACACCCCTGCCTTCAGCAGTCCCGTCTACCAATGTCACCCTCAAGGAAGACGCCTCTTCTTCGTCCTCAGCCTC AACATCTTGTAGTATTTTAAAAACCGCAGCCGGCGATGTTGTACTTTCTTTGTTTTCTTCAGAGGGGTCAGCACCGGCTT CGTTAAGTTCCCTTGCTACGCTTGCTTTAGCACAAATTTCTGCGATGGCTGGCGACAAAACTGATCTGTTTCAAGATTGT GCTCATAATTTTGTATTCTTATCTCCTGAAACAGTTGAACTTGAAATACAGATTGCCGACCTCCTGCAAACTTTAGAAAC GTTAAATCCTCAGACAACTAGCGAAGAAAAAACCCATTGTAAGCAACAAGAACAGAGCTTACTCCACAAAGGCTACGAAC CTCGGGAAGTCGCACCAAAATCGGCAAAAGATATCCCGAGCTCATCCAAAACATTGCCCCAGCCTCTAAAAGCGTTTTCT GGACATGCGTCTGCGAAAACTTCCGATTCCCGCCCTTCGGCAAACTCTTCAACGATTCCACATAACTCGGAACAATATAC ATCACGAGCTTCGCATTCTTCTACGCCATCGCAGCAACCTCGAACAGAAAAAGAGAGTGATTTCATTTCGTATTCATCTT CCCTTGCCTACACCACAGAAAAAAAAGAACAACAGATCTTTACAACGAAATCTCAAGAGTCCAAACAAGACCGAGAAAAC CGAGATCAAAAGCAAGATCAACAACGTAACGGGCAACATCAAGAAGAGAATCATCAAGAAAAACAGAGAGAAAAAAAACA CAAGTCACAGTTTGATATCGACAAAAATCTCCCTACATCTTCTCCATTATCTATAATGCAACTTCAGTATTTTGATGACT TACGCCAATCTCGAGAAATCGATATGGAGAAAGAAAACACCTTTAAGAAAAAAGCACCATCTCCGATGTCGTTGTTTGCT TCAGCAACGCCTACTCCAGGGTATGCTCCCATACAAACGCCAAAAATCGAAAACGTGTTCATACGTTTTATGAAACTGAT GGCAAGGATCCTGGGGCAGGCGGAAGCTGAGGCTCAAGAACTCTATCTTCGTGTTAAAGAACGTACTGATAATGTTGACA CTTTAACTCTATTAATTTCTAAAATTAATGCTGAGAAAGGTGCCATTGATTGGAGAAATAACGCAGAAATGAAAGCTCTT GTTGACCAAGCGAGAAAACTCGATGTCACCATATCAGATACGTTACAATGGACTGAAGAAGAGAAAAAGCTTCTGAGAGA AAATATTCAGATGCGCAAAGAAAATATGGAGAAAATTACCCAACTCGAAAGAACAGACATGCAAAGGCATCTTCAGGAAG TCTCGCAATGTCACCAAGCACGCTCCAATGTATTGAAACTTCTCAAAGAGCTCATGGATACCTTTATTTACAACTTGCGT CCGTAA
Upstream 100 bases:
>100_bases TATAGTCTAACCCTTTTATAATCAAACTTGCAGGAAAATTACGTTTTATATAATTTTCATCGCTTCTATGTCCCCATAAA TCACTCGTGCGAAAATTAGT
Downstream 100 bases:
>100_bases TGTCATATTTAGCGTATTTATTAGAAAAAGTAGCAGCCTCTAGCAAAGAAGATTTTCCTTTTCCTGATGATTTGGAAAGT TATCTTGCAGGATATTTCCC
Product: putative serine-rich protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNTPLPSAVPSTNVTLKEDASSSSSASTSCSILKTAAGDVVLSLFSSEGSAPASLSSLATLALAQISAMAGDKTDLFQDC AHNFVFLSPETVELEIQIADLLQTLETLNPQTTSEEKTHCKQQEQSLLHKGYEPREVAPKSAKDIPSSSKTLPQPLKAFS GHASAKTSDSRPSANSSTIPHNSEQYTSRASHSSTPSQQPRTEKESDFISYSSSLAYTTEKKEQQIFTTKSQESKQDREN RDQKQDQQRNGQHQEENHQEKQREKKHKSQFDIDKNLPTSSPLSIMQLQYFDDLRQSREIDMEKENTFKKKAPSPMSLFA SATPTPGYAPIQTPKIENVFIRFMKLMARILGQAEAEAQELYLRVKERTDNVDTLTLLISKINAEKGAIDWRNNAEMKAL VDQARKLDVTISDTLQWTEEEKKLLRENIQMRKENMEKITQLERTDMQRHLQEVSQCHQARSNVLKLLKELMDTFIYNLR P
Sequences:
>Translated_481_residues MNTPLPSAVPSTNVTLKEDASSSSSASTSCSILKTAAGDVVLSLFSSEGSAPASLSSLATLALAQISAMAGDKTDLFQDC AHNFVFLSPETVELEIQIADLLQTLETLNPQTTSEEKTHCKQQEQSLLHKGYEPREVAPKSAKDIPSSSKTLPQPLKAFS GHASAKTSDSRPSANSSTIPHNSEQYTSRASHSSTPSQQPRTEKESDFISYSSSLAYTTEKKEQQIFTTKSQESKQDREN RDQKQDQQRNGQHQEENHQEKQREKKHKSQFDIDKNLPTSSPLSIMQLQYFDDLRQSREIDMEKENTFKKKAPSPMSLFA SATPTPGYAPIQTPKIENVFIRFMKLMARILGQAEAEAQELYLRVKERTDNVDTLTLLISKINAEKGAIDWRNNAEMKAL VDQARKLDVTISDTLQWTEEEKKLLRENIQMRKENMEKITQLERTDMQRHLQEVSQCHQARSNVLKLLKELMDTFIYNLR P >Mature_481_residues MNTPLPSAVPSTNVTLKEDASSSSSASTSCSILKTAAGDVVLSLFSSEGSAPASLSSLATLALAQISAMAGDKTDLFQDC AHNFVFLSPETVELEIQIADLLQTLETLNPQTTSEEKTHCKQQEQSLLHKGYEPREVAPKSAKDIPSSSKTLPQPLKAFS GHASAKTSDSRPSANSSTIPHNSEQYTSRASHSSTPSQQPRTEKESDFISYSSSLAYTTEKKEQQIFTTKSQESKQDREN RDQKQDQQRNGQHQEENHQEKQREKKHKSQFDIDKNLPTSSPLSIMQLQYFDDLRQSREIDMEKENTFKKKAPSPMSLFA SATPTPGYAPIQTPKIENVFIRFMKLMARILGQAEAEAQELYLRVKERTDNVDTLTLLISKINAEKGAIDWRNNAEMKAL VDQARKLDVTISDTLQWTEEEKKLLRENIQMRKENMEKITQLERTDMQRHLQEVSQCHQARSNVLKLLKELMDTFIYNLR P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54214; Mature: 54214
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLPSAVPSTNVTLKEDASSSSSASTSCSILKTAAGDVVLSLFSSEGSAPASLSSLAT CCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LALAQISAMAGDKTDLFQDCAHNFVFLSPETVELEIQIADLLQTLETLNPQTTSEEKTHC HHHHHHHHHCCCHHHHHHHHHCCEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHH KQQEQSLLHKGYEPREVAPKSAKDIPSSSKTLPQPLKAFSGHASAKTSDSRPSANSSTIP HHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC HNSEQYTSRASHSSTPSQQPRTEKESDFISYSSSLAYTTEKKEQQIFTTKSQESKQDREN CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHCCCHHHHHHHHH RDQKQDQQRNGQHQEENHQEKQREKKHKSQFDIDKNLPTSSPLSIMQLQYFDDLRQSREI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DMEKENTFKKKAPSPMSLFASATPTPGYAPIQTPKIENVFIRFMKLMARILGQAEAEAQE CCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH LYLRVKERTDNVDTLTLLISKINAEKGAIDWRNNAEMKALVDQARKLDVTISDTLQWTEE HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEHHHHHHHHHH EKKLLRENIQMRKENMEKITQLERTDMQRHLQEVSQCHQARSNVLKLLKELMDTFIYNLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC P C >Mature Secondary Structure MNTPLPSAVPSTNVTLKEDASSSSSASTSCSILKTAAGDVVLSLFSSEGSAPASLSSLAT CCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LALAQISAMAGDKTDLFQDCAHNFVFLSPETVELEIQIADLLQTLETLNPQTTSEEKTHC HHHHHHHHHCCCHHHHHHHHHCCEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHH KQQEQSLLHKGYEPREVAPKSAKDIPSSSKTLPQPLKAFSGHASAKTSDSRPSANSSTIP HHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC HNSEQYTSRASHSSTPSQQPRTEKESDFISYSSSLAYTTEKKEQQIFTTKSQESKQDREN CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHCCCHHHHHHHHH RDQKQDQQRNGQHQEENHQEKQREKKHKSQFDIDKNLPTSSPLSIMQLQYFDDLRQSREI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DMEKENTFKKKAPSPMSLFASATPTPGYAPIQTPKIENVFIRFMKLMARILGQAEAEAQE CCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH LYLRVKERTDNVDTLTLLISKINAEKGAIDWRNNAEMKALVDQARKLDVTISDTLQWTEE HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEHHHHHHHHHH EKKLLRENIQMRKENMEKITQLERTDMQRHLQEVSQCHQARSNVLKLLKELMDTFIYNLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA