Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is bcp [H]
Identifier: 59712527
GI number: 59712527
Start: 2149194
End: 2149664
Strand: Direct
Name: bcp [H]
Synonym: VF_1920
Alternate gene names: 59712527
Gene position: 2149194-2149664 (Clockwise)
Preceding gene: 59712526
Following gene: 59712529
Centisome position: 74.17
GC content: 37.15
Gene sequence:
>471_bases ATGATCACACCATTAGCAGCAGGCTCAACTGCACCCAATGTATCGCTTTTAGATCAAAATGGAGAAAGCGTCTCGATTTC TGATTTTAAAGGTAAGAAAGTACTGTTTTACTTTTACCCTAAAGCGATGACGCCAGGATGTACCGTTCAAGCTCAAGGTC TTCGTGATATTAAATCAGAACTTGAAGCCCATAACGTAGTTACACTCGGTGTCAGTATTGACGCTGTAAAACGCCTTGGT AAATTTATCGAGCGTGATAATTTAAATTTCACTCTACTATCAGATGAAGATCATGCCGCAGCAGATGCATTTGGTGTTTG GGGTGAGAAAAAATTCATGGGTAAAGTGTACGATGGTTTACATCGCATCAGTTTTCTAATTAATGAAGAAGGTGTTATTG AGCACGTTTTCACTAAATTTAAGACCAAAGATCACCATGAAGTAGTATTAGATTATTTGAATAATAAATAA
Upstream 100 bases:
>100_bases AAAGGCAAATAGACCTAATACCATTCAGGATAAATAGTTGAACAAGCAAGAATGAGCAACTAACTATGTGGATTGGTATA AACCCATAAAAGGAAAGAGA
Downstream 100 bases:
>100_bases TTTAAACTTATAAAAATTAAAGGCGATATCACGAGTATCGCCTTTTTTATTGCCGTATTAATAATTCGCTTCTATTTCTG TTGCAGGAAGCGCTTTCCAC
Product: thioredoxin-dependent thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MITPLAAGSTAPNVSLLDQNGESVSISDFKGKKVLFYFYPKAMTPGCTVQAQGLRDIKSELEAHNVVTLGVSIDAVKRLG KFIERDNLNFTLLSDEDHAAADAFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFTKFKTKDHHEVVLDYLNNK
Sequences:
>Translated_156_residues MITPLAAGSTAPNVSLLDQNGESVSISDFKGKKVLFYFYPKAMTPGCTVQAQGLRDIKSELEAHNVVTLGVSIDAVKRLG KFIERDNLNFTLLSDEDHAAADAFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFTKFKTKDHHEVVLDYLNNK >Mature_156_residues MITPLAAGSTAPNVSLLDQNGESVSISDFKGKKVLFYFYPKAMTPGCTVQAQGLRDIKSELEAHNVVTLGVSIDAVKRLG KFIERDNLNFTLLSDEDHAAADAFGVWGEKKFMGKVYDGLHRISFLINEEGVIEHVFTKFKTKDHHEVVLDYLNNK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=152, Percent_Identity=61.8421052631579, Blast_Score=204, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6322180, Length=112, Percent_Identity=37.5, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17360; Mature: 17360
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITPLAAGSTAPNVSLLDQNGESVSISDFKGKKVLFYFYPKAMTPGCTVQAQGLRDIKSE CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHHH LEAHNVVTLGVSIDAVKRLGKFIERDNLNFTLLSDEDHAAADAFGVWGEKKFMGKVYDGL HHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHH HRISFLINEEGVIEHVFTKFKTKDHHEVVLDYLNNK HHHHHEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MITPLAAGSTAPNVSLLDQNGESVSISDFKGKKVLFYFYPKAMTPGCTVQAQGLRDIKSE CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCHHHHHHH LEAHNVVTLGVSIDAVKRLGKFIERDNLNFTLLSDEDHAAADAFGVWGEKKFMGKVYDGL HHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHH HRISFLINEEGVIEHVFTKFKTKDHHEVVLDYLNNK HHHHHEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]