| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711477
Identifier: 59711477
GI number: 59711477
Start: 954965
End: 955537
Strand: Reverse
Name: 59711477
Synonym: VF_0870
Alternate gene names: NA
Gene position: 955537-954965 (Counterclockwise)
Preceding gene: 59711478
Following gene: 59711476
Centisome position: 32.98
GC content: 39.62
Gene sequence:
>573_bases ATGCGTGATTTTTTAAACACCAAAAACCAAACCAACCAGTCGGTTTATTTGGCAATTTTGAGAATAAAAATGAAAACACC ATATCAAATCCAATTTGAAGCATTTAACGCTGACGATTTTTATACTGAAGCACATGCAAAACTGTATGCCCAATTTGCAG ACAATTTAATCAACGAAGGTAATTACTCTATCGTCTACAAAGGAGTTGCGCACGCCTGCTATACACCAATCACGATTGAT AAAGCCCCTCATCTAAAATGCTTTGTATTAGCGCCATTAGCGGTATTACCTGAACATCAAGGTAAAGGCTACGCCACACA ATTAATGGAACAAGCAGAAAGCGAATTAGGTGCTGATGTTATCTTCGTTCTCGGTGATCCAAAACATTACGCTCGACGCT TTAATGCTCAACATAACGTCGCACTGCCTATCGGTTCTGATGAATCACCAGATTTCTGGTTTGCTCGAGAGTTAACGACT GATGCACTTGATGGTATTGGTCAATCATCATCAACCATTAAAGGTGTGTTTGCGGATCCAATTATGTGGAGTCACCCAGA CGAACAAATTTAA
Upstream 100 bases:
>100_bases TAGCCATGAATTACTTGTTAAACAACGACTTTCCATTAATGGACATTAAACAAGAGTTCATTAAAAAGTACTGTCAATAA AACCTATCACGCATCAATAT
Downstream 100 bases:
>100_bases AACAAGGTACTTTTTGATTAAAACACTAGTTAGCATTGTATAAAAACCGTGTTTGGCTCCAAGTGGAACAAACACAATTT CAAAATCAACAATGAGGAAA
Product: acetyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRDFLNTKNQTNQSVYLAILRIKMKTPYQIQFEAFNADDFYTEAHAKLYAQFADNLINEGNYSIVYKGVAHACYTPITID KAPHLKCFVLAPLAVLPEHQGKGYATQLMEQAESELGADVIFVLGDPKHYARRFNAQHNVALPIGSDESPDFWFARELTT DALDGIGQSSSTIKGVFADPIMWSHPDEQI
Sequences:
>Translated_190_residues MRDFLNTKNQTNQSVYLAILRIKMKTPYQIQFEAFNADDFYTEAHAKLYAQFADNLINEGNYSIVYKGVAHACYTPITID KAPHLKCFVLAPLAVLPEHQGKGYATQLMEQAESELGADVIFVLGDPKHYARRFNAQHNVALPIGSDESPDFWFARELTT DALDGIGQSSSTIKGVFADPIMWSHPDEQI >Mature_190_residues MRDFLNTKNQTNQSVYLAILRIKMKTPYQIQFEAFNADDFYTEAHAKLYAQFADNLINEGNYSIVYKGVAHACYTPITID KAPHLKCFVLAPLAVLPEHQGKGYATQLMEQAESELGADVIFVLGDPKHYARRFNAQHNVALPIGSDESPDFWFARELTT DALDGIGQSSSTIKGVFADPIMWSHPDEQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21345; Mature: 21345
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFLNTKNQTNQSVYLAILRIKMKTPYQIQFEAFNADDFYTEAHAKLYAQFADNLINEG CCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC NYSIVYKGVAHACYTPITIDKAPHLKCFVLAPLAVLPEHQGKGYATQLMEQAESELGADV CEEEEEECHHHHHCCCEEECCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCEE IFVLGDPKHYARRFNAQHNVALPIGSDESPDFWFARELTTDALDGIGQSSSTIKGVFADP EEEECCCHHHHHHCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEECC IMWSHPDEQI EECCCCCCCC >Mature Secondary Structure MRDFLNTKNQTNQSVYLAILRIKMKTPYQIQFEAFNADDFYTEAHAKLYAQFADNLINEG CCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC NYSIVYKGVAHACYTPITIDKAPHLKCFVLAPLAVLPEHQGKGYATQLMEQAESELGADV CEEEEEECHHHHHCCCEEECCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCEE IFVLGDPKHYARRFNAQHNVALPIGSDESPDFWFARELTTDALDGIGQSSSTIKGVFADP EEEECCCHHHHHHCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEECC IMWSHPDEQI EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA