| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is envR [C]
Identifier: 59711478
GI number: 59711478
Start: 955558
End: 956100
Strand: Reverse
Name: envR [C]
Synonym: VF_0871
Alternate gene names: 59711478
Gene position: 956100-955558 (Counterclockwise)
Preceding gene: 59711479
Following gene: 59711477
Centisome position: 33.0
GC content: 36.28
Gene sequence:
>543_bases ATGAGTAAAAAAAGCCAAATAATAGAAACAGCAACAAGGTTATTTGCAGAACATGGCTTTGAGAATACGCCTGTATCATT GATATGTGAGGAGGCTGAAGTCTCAAAAGGCGCAGTATTTCATCACTTTAAGAATAAGAATGACATACTAAGAGAAGTCT TTATACACATTACCACTATCATTGAAGAAACCGACAAAAATGATGTTCATTTAGCGACTCAAGAAGATCCTCTTGAGGCT GCAATCCATGAAATTTTTGATGGTATGTCTGTCGCTAAATACAGAAAAATGTACCAATTTAACTTCAGCGTCATGGTTCA TCCAACAACAAGAGCGATCGTCGCTGATCTGATTGAAGACCGATATCAACAATTACAAACCTCAGCAGAAGAAATATTTC GTGCGGTGGGCTATTCAAACCCAGTAGTCATCACAAAGATGTTTATCGCAGAGATAGATGGTATAGCCATGAATTACTTG TTAAACAACGACTTTCCATTAATGGACATTAAACAAGAGTTCATTAAAAAGTACTGTCAATAA
Upstream 100 bases:
>100_bases CCATTTAAAAACGATGAAATTTCATCACCAAGATAATTTCTTGACAGTGACGCATGCTCATTGGTAAATTACAGACCGTC CAGTCGGTATTGAGGTGTGT
Downstream 100 bases:
>100_bases AACCTATCACGCATCAATATATGCGTGATTTTTTAAACACCAAAAACCAAACCAACCAGTCGGTTTATTTGGCAATTTTG AGAATAAAAATGAAAACACC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDILREVFIHITTIIEETDKNDVHLATQEDPLEA AIHEIFDGMSVAKYRKMYQFNFSVMVHPTTRAIVADLIEDRYQQLQTSAEEIFRAVGYSNPVVITKMFIAEIDGIAMNYL LNNDFPLMDIKQEFIKKYCQ
Sequences:
>Translated_180_residues MSKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDILREVFIHITTIIEETDKNDVHLATQEDPLEA AIHEIFDGMSVAKYRKMYQFNFSVMVHPTTRAIVADLIEDRYQQLQTSAEEIFRAVGYSNPVVITKMFIAEIDGIAMNYL LNNDFPLMDIKQEFIKKYCQ >Mature_179_residues SKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDILREVFIHITTIIEETDKNDVHLATQEDPLEAA IHEIFDGMSVAKYRKMYQFNFSVMVHPTTRAIVADLIEDRYQQLQTSAEEIFRAVGYSNPVVITKMFIAEIDGIAMNYLL NNDFPLMDIKQEFIKKYCQ
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20767; Mature: 20636
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDILREVFIHITTI CCCHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCHHHHHHCCHHHHHHHHHHHHHHH IEETDKNDVHLATQEDPLEAAIHEIFDGMSVAKYRKMYQFNFSVMVHPTTRAIVADLIED HHHCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH RYQQLQTSAEEIFRAVGYSNPVVITKMFIAEIDGIAMNYLLNNDFPLMDIKQEFIKKYCQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDILREVFIHITTI CCHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCHHHHHHCCHHHHHHHHHHHHHHH IEETDKNDVHLATQEDPLEAAIHEIFDGMSVAKYRKMYQFNFSVMVHPTTRAIVADLIED HHHCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH RYQQLQTSAEEIFRAVGYSNPVVITKMFIAEIDGIAMNYLLNNDFPLMDIKQEFIKKYCQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA