Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is ybeZ [H]
Identifier: 59711365
GI number: 59711365
Start: 826305
End: 827489
Strand: Reverse
Name: ybeZ [H]
Synonym: VF_0758
Alternate gene names: 59711365
Gene position: 827489-826305 (Counterclockwise)
Preceding gene: 59711366
Following gene: 59711364
Centisome position: 28.56
GC content: 40.0
Gene sequence:
>1185_bases ATGATTGAGGTTACTCAGTCATCTTTTTTCTTTTATAGTCTTGAGAAAATACCTTATTTACCCAATAAATACTGTATAGA TACCTTACTAGTTACTTTATGCGAGGCGACATTGAGCATTAAAACAACCAAATTAGAGTTGACCTTAGAGCCAGCAGACA ATCATCGTTTATCTAGCCTTTGTGGGCCTTTTGATGACAACATCAAGCACCTTGAACGTCGTTTAGGGGTGGAGATTAAC TATAGAGGCAACCTATTTACCGTGGTCGGTAAACCTCATACCGTTTCAGCTACTATTGATATTCTCAAAGATCTATACGT CGATACCGCTCCTGTAAAGAATCAATACCCTGATATTGAGCCAGAACAAATCCATTTAGCGGTAAAAGAATCCGGTGTTT TAGAACAGGCAAAAGAAGACGTTTCAACCATTCCTTATGGAAAAGAAGTCTTTATTAAAACCAAAAAAGGATTAATAAAG CCAAGAACTGAAAACCAAGCGCAATACGTAACCAACATGGTAACTCACGATATTACCTTTGGTATTGGCCCAGCAGGTAC AGGAAAGACCTACCTTGCCGTTGCAGCTGCCGTTGATGCTTTAGAACGCCAAGAAGTTCGTCGTATCCTGCTTACTCGTC CAGCTGTTGAAGCGGGTGAAAAATTAGGCTTTTTACCTGGTGATCTTAGCCAAAAGGTTGATCCGTATTTACGCCCTCTT TATGATGCGCTATTTGAAATGCTTGGCTTTGAACGTGTTGAGAAACTTATTGAACGCAACGTTATTGAAGTAGCTCCACT TGCTTATATGCGTGGTAGAACCCTTAACGATGCCTTTATCATCCTAGATGAAAGCCAAAATACAACTGTAGAACAAATGA AAATGTTCTTAACTCGTATTGGTTTTAATTCACGTGCGGTTATTACTGGCGATGTAACTCAAATTGATTTGCCTCGTGGC GCTAAATCAGGCCTTCGTCATGCGATTGAAGTTCTTTCTGAAGTGAATGAAATCAGCTTCAACTTCTTTATTGCTGATGA TGTGGTTCGCCATCCTGTCGTAGCTCGAATTGTGAACGCTTATGAAAAATGGGAAGCAAAAGATCAAAAAGAGCGTAAAC TAGAGGAAATACGCAGAAAGCAAGAGCGTGATGCTCGCATGGCTGAAGCAGAAAATAATCAGTAA
Upstream 100 bases:
>100_bases CAGCAGAAATGATGGAAAAGACACGTCGTGAAGATGATCTTGGTGTAGGTACTTTTACGCCATAGTGTGATCTCTTTAAT AAAATCAAAGACAAATAAAG
Downstream 100 bases:
>100_bases CAAAATCAGGTGAACAATGAGTATTGAACTCGATCTACAAATTGCATGTGAAAACGAAAACGGCTTACCATCAGAAAAAG AGCTGATGACATGGTTAAAT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MIEVTQSSFFFYSLEKIPYLPNKYCIDTLLVTLCEATLSIKTTKLELTLEPADNHRLSSLCGPFDDNIKHLERRLGVEIN YRGNLFTVVGKPHTVSATIDILKDLYVDTAPVKNQYPDIEPEQIHLAVKESGVLEQAKEDVSTIPYGKEVFIKTKKGLIK PRTENQAQYVTNMVTHDITFGIGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL YDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRIGFNSRAVITGDVTQIDLPRG AKSGLRHAIEVLSEVNEISFNFFIADDVVRHPVVARIVNAYEKWEAKDQKERKLEEIRRKQERDARMAEAENNQ
Sequences:
>Translated_394_residues MIEVTQSSFFFYSLEKIPYLPNKYCIDTLLVTLCEATLSIKTTKLELTLEPADNHRLSSLCGPFDDNIKHLERRLGVEIN YRGNLFTVVGKPHTVSATIDILKDLYVDTAPVKNQYPDIEPEQIHLAVKESGVLEQAKEDVSTIPYGKEVFIKTKKGLIK PRTENQAQYVTNMVTHDITFGIGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL YDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRIGFNSRAVITGDVTQIDLPRG AKSGLRHAIEVLSEVNEISFNFFIADDVVRHPVVARIVNAYEKWEAKDQKERKLEEIRRKQERDARMAEAENNQ >Mature_394_residues MIEVTQSSFFFYSLEKIPYLPNKYCIDTLLVTLCEATLSIKTTKLELTLEPADNHRLSSLCGPFDDNIKHLERRLGVEIN YRGNLFTVVGKPHTVSATIDILKDLYVDTAPVKNQYPDIEPEQIHLAVKESGVLEQAKEDVSTIPYGKEVFIKTKKGLIK PRTENQAQYVTNMVTHDITFGIGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL YDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRIGFNSRAVITGDVTQIDLPRG AKSGLRHAIEVLSEVNEISFNFFIADDVVRHPVVARIVNAYEKWEAKDQKERKLEEIRRKQERDARMAEAENNQ
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=337, Percent_Identity=79.2284866468843, Blast_Score=528, Evalue=1e-151, Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=44.8780487804878, Blast_Score=187, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 44659; Mature: 44659
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVTQSSFFFYSLEKIPYLPNKYCIDTLLVTLCEATLSIKTTKLELTLEPADNHRLSSL CEEEECCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHH CGPFDDNIKHLERRLGVEINYRGNLFTVVGKPHTVSATIDILKDLYVDTAPVKNQYPDIE CCCCCHHHHHHHHHHCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC PEQIHLAVKESGVLEQAKEDVSTIPYGKEVFIKTKKGLIKPRTENQAQYVTNMVTHDITF HHHEEEEEHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEE GIGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHH YDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRI HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHC GFNSRAVITGDVTQIDLPRGAKSGLRHAIEVLSEVNEISFNFFIADDVVRHPVVARIVNA CCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHH YEKWEAKDQKERKLEEIRRKQERDARMAEAENNQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIEVTQSSFFFYSLEKIPYLPNKYCIDTLLVTLCEATLSIKTTKLELTLEPADNHRLSSL CEEEECCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCHHHHH CGPFDDNIKHLERRLGVEINYRGNLFTVVGKPHTVSATIDILKDLYVDTAPVKNQYPDIE CCCCCHHHHHHHHHHCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC PEQIHLAVKESGVLEQAKEDVSTIPYGKEVFIKTKKGLIKPRTENQAQYVTNMVTHDITF HHHEEEEEHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEE GIGPAGTGKTYLAVAAAVDALERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHH YDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRI HHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHC GFNSRAVITGDVTQIDLPRGAKSGLRHAIEVLSEVNEISFNFFIADDVVRHPVVARIVNA CCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHH YEKWEAKDQKERKLEEIRRKQERDARMAEAENNQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]