Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
---|---|
Accession | NC_006840 |
Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is ampG [H]
Identifier: 59711327
GI number: 59711327
Start: 787211
End: 788554
Strand: Reverse
Name: ampG [H]
Synonym: VF_0720
Alternate gene names: 59711327
Gene position: 788554-787211 (Counterclockwise)
Preceding gene: 59711328
Following gene: 59711326
Centisome position: 27.21
GC content: 39.51
Gene sequence:
>1344_bases ATGTCTCATTCCATGCAATGGAAAACAGCCATAAAAAGCTACATGGATAAACGTTTACTTTGGGTTTTCATGCTAGGTTG TTCTAGTGGTTTTCCTTGGGTGCTTATTGGCTCAAATATGTCAGGTTGGCTAAAAGATGCAGGACTGACTCGAGCTGCCA TTGGTTATTTTGGTTCTGTATTTGCTGTATATGCCATTAATTTTATGTGGGCACCGCTGGTTGATCGTGTAAAACTTCCT TTTATTGGAAATAAACTTGGTCAACGTCGCAGTTGGATCTTCGTTTGCCAAGCTATTGTTTTCTTCTGCACATTACAAAT TGCGGGCTTAGATCCATCCAAAAATTTAATGCTAACATCAATGTTTGCACTCGCTATTGCAACAGCATCAGCGACACAAG ATGTTGCCATTGATGCATTTCGTATTGATACTTTCCCAAAATCAGAATCAACTAAAATGCCTCAAGCATCAGCAATGGCC GTCATTGGTTGGTGGACAGGCTATTCATTACCTGGTTATCTCGCTTTTATTAATGCAGACAGCATCGGATGGAATGGCGT TTACTATGGTATGGCAGGAATTGTTGGCTTATTAATGGTATTCACTCTATTAGTTGGTGAACCAAAAACCAAACGTGATG AGCTACAGCACGAAGCCGAAGAGCGTCACAATAAATTGGTTGGTTCTAAAGTTGCCGCTTGGTTTACTGTAACAGTAATT GAGCCATTTTATGATTTCTTTAACCGAAATGGAGTAAAGACAGCCTGTACCCTTCTACTATTTGTTTTCTTATTTAAAAT TGGTGAGGCTTTTCTGGGAAGAATGTCGATCACTTTTTATAAAGAAATCGGATTTAGTAACGAACAAATTGGCTATTACT CTAAACTGATCGGCTGGGGAGCAACCGTATTCTTCACCCTATTAGGCAGCTTAATCAACGTTCGTTTTGGGGTTGTAAAA GGCTTAATGATTGGCGGTGTCGCTATGGCTGCAAGTAATCTAATGTTTGCGCTTATCGCCAATGTCGGTCCTAATGAACA TTTATTCCTAGCAACGATTATTGTTGATAACTTCACAACGGCGTTTTCAACCGTCGCCTTTGTATCCTTCTTAACCATAC TTACTGGAGAAGCATTCTCTGCGACTCAATATGCATTACTGGCTTCATTAGGCAACTTAGGTAGAACAACATTAGCGTCT TTTAGTGGTGAGTTAGCCGACTATTTAAATAGCTGGCCTTTATTCTTTATATTAACAGCGGTAATGGTTATCCCTAGTCT AATTATGCTGCTTATGCTTAAAGGGTATTTCAAAGCGCTTCTTGATAAGCATCAAAGCTCTTAA
Upstream 100 bases:
>100_bases CATTAATTAAATAATTTAGTTAATATAGCACTACTCTAAAGCAGCTTTCGGGCTGCTTTTTCTATCTATTTCAATAAGAA CAAATAACAAGGAGCGTTTC
Downstream 100 bases:
>100_bases AGTTCTTATACGTAACAACTGTGCTACCAAAGCCTCCTAATCTAGGAGGCCTTTTTGTTTCTGTTCACATTTTTACGTCA GAGTTTTGTCAAGTAAGTGA
Product: muropeptide transporter AmpG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFMWAPLVDRVKLP FIGNKLGQRRSWIFVCQAIVFFCTLQIAGLDPSKNLMLTSMFALAIATASATQDVAIDAFRIDTFPKSESTKMPQASAMA VIGWWTGYSLPGYLAFINADSIGWNGVYYGMAGIVGLLMVFTLLVGEPKTKRDELQHEAEERHNKLVGSKVAAWFTVTVI EPFYDFFNRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGYYSKLIGWGATVFFTLLGSLINVRFGVVK GLMIGGVAMAASNLMFALIANVGPNEHLFLATIIVDNFTTAFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLAS FSGELADYLNSWPLFFILTAVMVIPSLIMLLMLKGYFKALLDKHQSS
Sequences:
>Translated_447_residues MSHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFMWAPLVDRVKLP FIGNKLGQRRSWIFVCQAIVFFCTLQIAGLDPSKNLMLTSMFALAIATASATQDVAIDAFRIDTFPKSESTKMPQASAMA VIGWWTGYSLPGYLAFINADSIGWNGVYYGMAGIVGLLMVFTLLVGEPKTKRDELQHEAEERHNKLVGSKVAAWFTVTVI EPFYDFFNRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGYYSKLIGWGATVFFTLLGSLINVRFGVVK GLMIGGVAMAASNLMFALIANVGPNEHLFLATIIVDNFTTAFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLAS FSGELADYLNSWPLFFILTAVMVIPSLIMLLMLKGYFKALLDKHQSS >Mature_446_residues SHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFMWAPLVDRVKLPF IGNKLGQRRSWIFVCQAIVFFCTLQIAGLDPSKNLMLTSMFALAIATASATQDVAIDAFRIDTFPKSESTKMPQASAMAV IGWWTGYSLPGYLAFINADSIGWNGVYYGMAGIVGLLMVFTLLVGEPKTKRDELQHEAEERHNKLVGSKVAAWFTVTVIE PFYDFFNRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGYYSKLIGWGATVFFTLLGSLINVRFGVVKG LMIGGVAMAASNLMFALIANVGPNEHLFLATIIVDNFTTAFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLASF SGELADYLNSWPLFFILTAVMVIPSLIMLLMLKGYFKALLDKHQSS
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=426, Percent_Identity=29.1079812206573, Blast_Score=187, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49314; Mature: 49182
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHH FAVYAINFMWAPLVDRVKLPFIGNKLGQRRSWIFVCQAIVFFCTLQIAGLDPSKNLMLTS HHHHHHHHHHHHHHHHCCCCHHHCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MFALAIATASATQDVAIDAFRIDTFPKSESTKMPQASAMAVIGWWTGYSLPGYLAFINAD HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEEEEECC SIGWNGVYYGMAGIVGLLMVFTLLVGEPKTKRDELQHEAEERHNKLVGSKVAAWFTVTVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPFYDFFNRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGYYSKLIGWG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ATVFFTLLGSLINVRFGVVKGLMIGGVAMAASNLMFALIANVGPNEHLFLATIIVDNFTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH AFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLASFSGELADYLNSWPLFFILTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH VMVIPSLIMLLMLKGYFKALLDKHQSS HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHH FAVYAINFMWAPLVDRVKLPFIGNKLGQRRSWIFVCQAIVFFCTLQIAGLDPSKNLMLTS HHHHHHHHHHHHHHHHCCCCHHHCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MFALAIATASATQDVAIDAFRIDTFPKSESTKMPQASAMAVIGWWTGYSLPGYLAFINAD HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEEEEECC SIGWNGVYYGMAGIVGLLMVFTLLVGEPKTKRDELQHEAEERHNKLVGSKVAAWFTVTVI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPFYDFFNRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYKEIGFSNEQIGYYSKLIGWG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ATVFFTLLGSLINVRFGVVKGLMIGGVAMAASNLMFALIANVGPNEHLFLATIIVDNFTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH AFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLASFSGELADYLNSWPLFFILTA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH VMVIPSLIMLLMLKGYFKALLDKHQSS HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]