Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
---|---|
Accession | NC_006840 |
Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is panE [H]
Identifier: 59711325
GI number: 59711325
Start: 785155
End: 786060
Strand: Reverse
Name: panE [H]
Synonym: VF_0718
Alternate gene names: 59711325
Gene position: 786060-785155 (Counterclockwise)
Preceding gene: 59711326
Following gene: 59711324
Centisome position: 27.13
GC content: 36.53
Gene sequence:
>906_bases ATGGATTCATCTGTGAATATCACCATTCTTGGTCCTGGTGCAGTCGGCTCTTTATGGGCATGCTATCTGCAAAAAGCAGG ACACAATATCTGTTTATGGACAAGAAATTCAACACCTTCTGAGCAACTACTTTCATTATCCGCTAATGAAAACTCATCAC ACCAATTTAAGTGCAATGATAAACAAGCCTTGAACGATTGTGATTTGCTATTAATTACAGTTAAAGCTTGGCAAGTCGAA AGCGCCTTACTCCCTTTACTTCCATCATTATCAAAAGAAACCATACTGCTATTTATGCATAATGGCATGGGAGCAATTGA TGACTTAAAAGAACACATTAATCACCACCCAATTTTGCAAGCAACGACGACTCATGGTGCATTAAAAGAAAATAACACTA ACGTAATCCATACAGGTTATGGAAATGCCTCAGTAGGCCCATTTAACCCACTAGGTAAACAGTGTCAGTTTATTCAAGAT GTATTAAATCATAGCTTGCCAAGTGTCGATTGGAACCCAGAAATTAATATCGCATTATGGAAAAAACTCGCTATCAACTG TGCAATTAACCCATTAACAGCAATTCATCAATGTAAGAATGGACAATTAGCACAACCCGACATCCATCAATATGTAATGA ACATTTGCTCTGAAGTACATCAAGTTCTACAAGAAGAAAATATTGAATGGACAGAGAATGAATTAGTCTCAACGGTCACG CAAGTAATAACCGCAACGTCTGCTAATTACTCATCAATGAACCGTGACTGTTTTTATCAACGTAAGACTGAAATTGATTT TATTACTGGCTACTTATTACAGCGAGCCGAATTTCATGGAATTTCAGCACCTACCAATCTATCGTTATATAATCAAATTA AACAATTAGAAGAGAACACATTATGA
Upstream 100 bases:
>100_bases TCTAATCTAACTTAGAATACCTATTTTACTAAGGCGCTCACTATGAGCGCCTTTGTTTTTTGTAGCAAACCAATTACACT GCTTTCATTATTTCTTCTTA
Downstream 100 bases:
>100_bases CGAAAAAAATTCTCGTATGTATAGCACCCGGCACTGAAGAATTAGAAGCCATTACGGTCATTGATATTCTAGAACGAGCA AAATTTGATGTAACCGTTGC
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MDSSVNITILGPGAVGSLWACYLQKAGHNICLWTRNSTPSEQLLSLSANENSSHQFKCNDKQALNDCDLLLITVKAWQVE SALLPLLPSLSKETILLFMHNGMGAIDDLKEHINHHPILQATTTHGALKENNTNVIHTGYGNASVGPFNPLGKQCQFIQD VLNHSLPSVDWNPEINIALWKKLAINCAINPLTAIHQCKNGQLAQPDIHQYVMNICSEVHQVLQEENIEWTENELVSTVT QVITATSANYSSMNRDCFYQRKTEIDFITGYLLQRAEFHGISAPTNLSLYNQIKQLEENTL
Sequences:
>Translated_301_residues MDSSVNITILGPGAVGSLWACYLQKAGHNICLWTRNSTPSEQLLSLSANENSSHQFKCNDKQALNDCDLLLITVKAWQVE SALLPLLPSLSKETILLFMHNGMGAIDDLKEHINHHPILQATTTHGALKENNTNVIHTGYGNASVGPFNPLGKQCQFIQD VLNHSLPSVDWNPEINIALWKKLAINCAINPLTAIHQCKNGQLAQPDIHQYVMNICSEVHQVLQEENIEWTENELVSTVT QVITATSANYSSMNRDCFYQRKTEIDFITGYLLQRAEFHGISAPTNLSLYNQIKQLEENTL >Mature_301_residues MDSSVNITILGPGAVGSLWACYLQKAGHNICLWTRNSTPSEQLLSLSANENSSHQFKCNDKQALNDCDLLLITVKAWQVE SALLPLLPSLSKETILLFMHNGMGAIDDLKEHINHHPILQATTTHGALKENNTNVIHTGYGNASVGPFNPLGKQCQFIQD VLNHSLPSVDWNPEINIALWKKLAINCAINPLTAIHQCKNGQLAQPDIHQYVMNICSEVHQVLQEENIEWTENELVSTVT QVITATSANYSSMNRDCFYQRKTEIDFITGYLLQRAEFHGISAPTNLSLYNQIKQLEENTL
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=297, Percent_Identity=40.7407407407407, Blast_Score=207, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6321854, Length=334, Percent_Identity=24.251497005988, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 33572; Mature: 33572
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSVNITILGPGAVGSLWACYLQKAGHNICLWTRNSTPSEQLLSLSANENSSHQFKCND CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHEEECCCCCCCCEEEECC KQALNDCDLLLITVKAWQVESALLPLLPSLSKETILLFMHNGMGAIDDLKEHINHHPILQ HHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEE ATTTHGALKENNTNVIHTGYGNASVGPFNPLGKQCQFIQDVLNHSLPSVDWNPEINIALW EECCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHEEH KKLAINCAINPLTAIHQCKNGQLAQPDIHQYVMNICSEVHQVLQEENIEWTENELVSTVT HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QVITATSANYSSMNRDCFYQRKTEIDFITGYLLQRAEFHGISAPTNLSLYNQIKQLEENT HHHHHCCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC L C >Mature Secondary Structure MDSSVNITILGPGAVGSLWACYLQKAGHNICLWTRNSTPSEQLLSLSANENSSHQFKCND CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHEEECCCCCCCCEEEECC KQALNDCDLLLITVKAWQVESALLPLLPSLSKETILLFMHNGMGAIDDLKEHINHHPILQ HHCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEE ATTTHGALKENNTNVIHTGYGNASVGPFNPLGKQCQFIQDVLNHSLPSVDWNPEINIALW EECCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHEEH KKLAINCAINPLTAIHQCKNGQLAQPDIHQYVMNICSEVHQVLQEENIEWTENELVSTVT HHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QVITATSANYSSMNRDCFYQRKTEIDFITGYLLQRAEFHGISAPTNLSLYNQIKQLEENT HHHHHCCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]