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The map label for this gene is yajL [H]

Identifier: 59711324

GI number: 59711324

Start: 784568

End: 785158

Strand: Reverse

Name: yajL [H]

Synonym: VF_0717

Alternate gene names: 59711324

Gene position: 785158-784568 (Counterclockwise)

Preceding gene: 59711325

Following gene: 59711320

Centisome position: 27.1

GC content: 38.58

Gene sequence:

>591_bases
ATGACGAAAAAAATTCTCGTATGTATAGCACCCGGCACTGAAGAATTAGAAGCCATTACGGTCATTGATATTCTAGAACG
AGCAAAATTTGATGTAACCGTTGCTAGTACTGCTTTTGATGGTTCATTAACAATGAAGGCAGCACAAAGAGTGATGTTAA
CCGCTGATGTAAAACTGGTTGAAGTTGCTGATGAAGAGTTTGATTGTATTGTTCTACCGGGTGGATTAAAAGGATCTGAA
AATTTCAGAGACAGTACCCTACTCATTGAGATGTTAAAACAACAAAAATACGATGAAAAATGGGTAGCTGCAATTTGTGC
TGCACCAGCCATTGTTTTACAACATCATAATTTATATCCAGACGCATTAATGACGTGCTACCCAAGCTTTATGGAAGCGA
TTCCAGAGAAAAACCGTCGTATTAAGCGTGTATTTACGGATGTGCTAAATCACTTAATCACAAGCCAGGGTCCAGGTTCG
GCTCTTGAGTTTGCGATGGAAATTGTCACAACTCTTGCGGGTAAAGAGCTTACTGCTAAATTAGCTGCTGATTTAGTAAC
ACTTCCTAATCTTAATTATCATCAAGTCTAA

Upstream 100 bases:

>100_bases
TTACTGGCTACTTATTACAGCGAGCCGAATTTCATGGAATTTCAGCACCTACCAATCTATCGTTATATAATCAAATTAAA
CAATTAGAAGAGAACACATT

Downstream 100 bases:

>100_bases
CTCCAATCGGTGATAGACAAAAAAAGGGCGTTGAATAATCAACGCCCTTTTTAAATATTACATATTTACGAACTATGGAC
GGTAAACTTTTACGTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTKKILVCIAPGTEELEAITVIDILERAKFDVTVASTAFDGSLTMKAAQRVMLTADVKLVEVADEEFDCIVLPGGLKGSE
NFRDSTLLIEMLKQQKYDEKWVAAICAAPAIVLQHHNLYPDALMTCYPSFMEAIPEKNRRIKRVFTDVLNHLITSQGPGS
ALEFAMEIVTTLAGKELTAKLAADLVTLPNLNYHQV

Sequences:

>Translated_196_residues
MTKKILVCIAPGTEELEAITVIDILERAKFDVTVASTAFDGSLTMKAAQRVMLTADVKLVEVADEEFDCIVLPGGLKGSE
NFRDSTLLIEMLKQQKYDEKWVAAICAAPAIVLQHHNLYPDALMTCYPSFMEAIPEKNRRIKRVFTDVLNHLITSQGPGS
ALEFAMEIVTTLAGKELTAKLAADLVTLPNLNYHQV
>Mature_195_residues
TKKILVCIAPGTEELEAITVIDILERAKFDVTVASTAFDGSLTMKAAQRVMLTADVKLVEVADEEFDCIVLPGGLKGSEN
FRDSTLLIEMLKQQKYDEKWVAAICAAPAIVLQHHNLYPDALMTCYPSFMEAIPEKNRRIKRVFTDVLNHLITSQGPGSA
LEFAMEIVTTLAGKELTAKLAADLVTLPNLNYHQV

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=197, Percent_Identity=35.0253807106599, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI31543380, Length=197, Percent_Identity=35.0253807106599, Blast_Score=105, Evalue=2e-23,
Organism=Escherichia coli, GI87081736, Length=196, Percent_Identity=48.469387755102, Blast_Score=185, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17531319, Length=182, Percent_Identity=36.2637362637363, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17558714, Length=168, Percent_Identity=32.1428571428571, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28571932, Length=192, Percent_Identity=40.1041666666667, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24653499, Length=183, Percent_Identity=33.879781420765, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 21609; Mature: 21478

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKILVCIAPGTEELEAITVIDILERAKFDVTVASTAFDGSLTMKAAQRVMLTADVKLV
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEE
EVADEEFDCIVLPGGLKGSENFRDSTLLIEMLKQQKYDEKWVAAICAAPAIVLQHHNLYP
EECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH
DALMTCYPSFMEAIPEKNRRIKRVFTDVLNHLITSQGPGSALEFAMEIVTTLAGKELTAK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH
LAADLVTLPNLNYHQV
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKKILVCIAPGTEELEAITVIDILERAKFDVTVASTAFDGSLTMKAAQRVMLTADVKLV
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEE
EVADEEFDCIVLPGGLKGSENFRDSTLLIEMLKQQKYDEKWVAAICAAPAIVLQHHNLYP
EECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCH
DALMTCYPSFMEAIPEKNRRIKRVFTDVLNHLITSQGPGSALEFAMEIVTTLAGKELTAK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH
LAADLVTLPNLNYHQV
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]