Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711316

Identifier: 59711316

GI number: 59711316

Start: 777099

End: 777377

Strand: Reverse

Name: 59711316

Synonym: VF_0709

Alternate gene names: NA

Gene position: 777377-777099 (Counterclockwise)

Preceding gene: 59711318

Following gene: 59711305

Centisome position: 26.83

GC content: 33.69

Gene sequence:

>279_bases
ATGATGAAATCAGACGTAGATAAAATGCTACATAAACATCAACAGCTAACCCATAGTGTTGATGTCAAAGTCACTTCTCA
TACTCAAAGAGATATCGGTGATTGGATACAGCATACTATTATGATTGAAGGTTGTAATGTTCCATTTAAATTTAATAGAA
CAAAAGCCTACCAATCTCTCAAAGGAGCAAAAGTTAATCTAACCTATTACCCTAGTAATGAAAAAATTGCAGGCTTTGAT
ATTGAAGTAATGAGAGTCGTTCGAGTTAAGCGAAGCTAA

Upstream 100 bases:

>100_bases
GAGCAACACAATACACTTTTTTAGACATACAGCTTTCCTTGTTATATTGACTGAAATGAGGATATATCTCATCATTAGAT
GTATTTAACTAACGAGCCTA

Downstream 100 bases:

>100_bases
TTACGAGTCAAAAGGTGGCAACCCGTTCTCTGATTTATAAAAAGCCAATGCATCCAGTATTGACTTTTCTTTTATTGGCT
TAGTAATAATATAGTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MMKSDVDKMLHKHQQLTHSVDVKVTSHTQRDIGDWIQHTIMIEGCNVPFKFNRTKAYQSLKGAKVNLTYYPSNEKIAGFD
IEVMRVVRVKRS

Sequences:

>Translated_92_residues
MMKSDVDKMLHKHQQLTHSVDVKVTSHTQRDIGDWIQHTIMIEGCNVPFKFNRTKAYQSLKGAKVNLTYYPSNEKIAGFD
IEVMRVVRVKRS
>Mature_92_residues
MMKSDVDKMLHKHQQLTHSVDVKVTSHTQRDIGDWIQHTIMIEGCNVPFKFNRTKAYQSLKGAKVNLTYYPSNEKIAGFD
IEVMRVVRVKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10706; Mature: 10706

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSDVDKMLHKHQQLTHSVDVKVTSHTQRDIGDWIQHTIMIEGCNVPFKFNRTKAYQSL
CCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHEEEEECCCCCEEECHHHHHHHC
KGAKVNLTYYPSNEKIAGFDIEVMRVVRVKRS
CCCEEEEEEECCCCCEECCCHHHHHEEHHCCC
>Mature Secondary Structure
MMKSDVDKMLHKHQQLTHSVDVKVTSHTQRDIGDWIQHTIMIEGCNVPFKFNRTKAYQSL
CCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHEEEEECCCCCEEECHHHHHHHC
KGAKVNLTYYPSNEKIAGFDIEVMRVVRVKRS
CCCEEEEEEECCCCCEECCCHHHHHEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA