| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yeiG [H]
Identifier: 59711251
GI number: 59711251
Start: 703176
End: 704018
Strand: Reverse
Name: yeiG [H]
Synonym: VF_0644
Alternate gene names: 59711251
Gene position: 704018-703176 (Counterclockwise)
Preceding gene: 59711252
Following gene: 59711249
Centisome position: 24.3
GC content: 38.91
Gene sequence:
>843_bases ATGACAATCGAAAATATCAGCCAAGCAAAAGTTGCGGGTGGTTGGCACAAACAATACACACATACTTCATCATCTCTAAA CTGCAATATGCGCTTTGCTATTTTCTTACCTGCAAACGCATCTGAAAGTAATCCGGTTCCTGTTTTATACTGGTTATCAG GCTTAACTTGTACTGATGAAAACTTCATGCAAAAAGCTGGCGCTTTCAAAAAAGCAGCTGAATTAGGTATTGCTATTGTG GCTATGGATACAAGTCCTCGCGGTGAAGACGTTGCTGATGATGCAGAAGGTGCATACGATTTTGGCCTAGGTGCAGGGTT CTATTTAAATGCAACTCAAGCTCCTTGGAACCGTCACTATCATATGTATGACTATGTGACAAAAGAGCTACCATCATTAA TCGAAGAGCACTTCCCTGTATCAGATAAAAAATCGATTTCTGGTCACAGTATGGGTGGTCATGGTGCTATTACCATCGGC TTAAAAAACCAAGATATGTATCAATCTATTTCTGCCTTTAGTCCTATTGCTAGCCCAATTAACTGTCCTTGGGGACAAAA AGCGTTAGGTTTATACTTAGGTGATAATAAAGAAGCTTGGTTAGAATACGACAGTTCTGAACTTCTTAAAAAAGGCTCAA AACTTCCAATCTTAGTTGACCAAGGTGAAGCTGACGGCTTTTTAGAAGAACAATTAAAACCTGAATACCTTCTCTCTTCG GCAGAGAAATCAGGAACTGATATTGAAGTTAGAATGCAACCAGGCTATGACCATAGCTACTTTTTCATCTCAACATTTAT TGATGAGCATTTAGAATTCCACGCTTCTCACTTGAATAAATAA
Upstream 100 bases:
>100_bases GTGTTTCATTCTTTATTTTAAAGCACTTCAAAATCAACCAGTAGATACCTATTCAATACAGTGATCTCGCTGATACGAAT CAAATATAAAAGGGCTCATC
Downstream 100 bases:
>100_bases CAACAAAAATAGAAAAAGCCCAGAGAGGATATCTCTGGGCTTTTTTATGTTATTTAGAAAATTAATCTTAGATAAATGCA AGTATTGGAGAGATACAAAG
Product: esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTIENISQAKVAGGWHKQYTHTSSSLNCNMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIV AMDTSPRGEDVADDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIG LKNQDMYQSISAFSPIASPINCPWGQKALGLYLGDNKEAWLEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS AEKSGTDIEVRMQPGYDHSYFFISTFIDEHLEFHASHLNK
Sequences:
>Translated_280_residues MTIENISQAKVAGGWHKQYTHTSSSLNCNMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIV AMDTSPRGEDVADDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIG LKNQDMYQSISAFSPIASPINCPWGQKALGLYLGDNKEAWLEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS AEKSGTDIEVRMQPGYDHSYFFISTFIDEHLEFHASHLNK >Mature_279_residues TIENISQAKVAGGWHKQYTHTSSSLNCNMRFAIFLPANASESNPVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVA MDTSPRGEDVADDAEGAYDFGLGAGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGL KNQDMYQSISAFSPIASPINCPWGQKALGLYLGDNKEAWLEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSSA EKSGTDIEVRMQPGYDHSYFFISTFIDEHLEFHASHLNK
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=283, Percent_Identity=49.1166077738516, Blast_Score=290, Evalue=1e-78, Organism=Escherichia coli, GI1788477, Length=281, Percent_Identity=53.7366548042705, Blast_Score=310, Evalue=7e-86, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=52.158273381295, Blast_Score=301, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17510185, Length=288, Percent_Identity=50, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6322393, Length=293, Percent_Identity=44.7098976109215, Blast_Score=241, Evalue=1e-64, Organism=Drosophila melanogaster, GI45551932, Length=284, Percent_Identity=47.887323943662, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24648347, Length=284, Percent_Identity=47.887323943662, Blast_Score=274, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30989; Mature: 30858
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIENISQAKVAGGWHKQYTHTSSSLNCNMRFAIFLPANASESNPVPVLYWLSGLTCTDE CCCCCCCHHHHCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCEECCH NFMQKAGAFKKAAELGIAIVAMDTSPRGEDVADDAEGAYDFGLGAGFYLNATQAPWNRHY HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCE HMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGLKNQDMYQSISAFSPIASPI EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCC NCPWGQKALGLYLGDNKEAWLEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS CCCCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHHH AEKSGTDIEVRMQPGYDHSYFFISTFIDEHLEFHASHLNK HCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIENISQAKVAGGWHKQYTHTSSSLNCNMRFAIFLPANASESNPVPVLYWLSGLTCTDE CCCCCCHHHHCCCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCEECCH NFMQKAGAFKKAAELGIAIVAMDTSPRGEDVADDAEGAYDFGLGAGFYLNATQAPWNRHY HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCE HMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGLKNQDMYQSISAFSPIASPI EHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCC NCPWGQKALGLYLGDNKEAWLEYDSSELLKKGSKLPILVDQGEADGFLEEQLKPEYLLSS CCCCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHHH AEKSGTDIEVRMQPGYDHSYFFISTFIDEHLEFHASHLNK HCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA