| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pheA [H]
Identifier: 59711168
GI number: 59711168
Start: 609224
End: 610402
Strand: Reverse
Name: pheA [H]
Synonym: VF_0561
Alternate gene names: 59711168
Gene position: 610402-609224 (Counterclockwise)
Preceding gene: 59711169
Following gene: 59711167
Centisome position: 21.07
GC content: 36.39
Gene sequence:
>1179_bases ATGACTGACACTCACTACTCCCTTGATGATATTCGTTTACGCCTTAATGAACTTGATAATGAATTATTAAAGCTCTTTTC AGAACGTCGTAAACTCAGTCTTGATGTTGCTAAAAGTAAAGTTAAAACCGCGAAACCTGTTCGAGATCCTAAACGAGAGC AACAATTACTTGTTAAACTCATTGAGAACGGTAAAGACTTCGATCTTGATGCTTATTACATTACACAGTTATTTCATACC ATTATTGAAGATTCAGTTTTACTTCAGCAAGAATACTTCCAAAATCTAGCAAACCCTGACTTAAGTAGAAAACCCGTAGC AAGAGTGGCTTACCTTGGCTCAAAAGGCTCATATTCAAATCTAGCAAGCCGTCGTTATTTCAGCAAAAAGAATATTGAAT TAGCTGAGTTAGGCTGTGAAAACTTTAAAGAAGTCATTAAAACCGTTGAGTCAGGTCATGCTGATTACGGCGTATTGCCA ATTGAAAATACAAGCTCAGGTTCGATTAACCAAGTTTATGATTTACTCCAACACACTAGCCTATACATTGTTGGGGAATT AACTCAAAAAATTGATCATTGTTTATTAACAACGACTGAAACCTCTCTTGAATCAATTAAAACCTTGTATTCACACCCAC AGCCACATGAACAATGTAGCGAATTTTTAAATCGACTCAATAATGTTGAGCTAATTTCTTGTGCAAGCACTGCTGATGCG ATGATCACTGTAAAAGAATTAAACTCACCTGAAGTGGCAGCAATTGGTAACTCTGATAGTGGAAAGCTATATGGACTGCA ATCCCTAATCACTAATATTTCGAATCAAACAGAAAACCAAACACGTTTTATCGTTGTTGCAAGAAAGCCTGTGGATGTAT CAGAGCAAATTCCAGCTAAAACAACATTAATAATGTCCACAGCTCAAGATGCTGGTTCATTGGTTGAATCTCTATTGGTA TTACAAAAATACGGCATCAATATGAGCAAGCTAGAATCTCGCCCTATTATGGGAAATCCTTGGGAAGAAATGTTCTATGT TGATCTAGAAGCGCATCTAAAATCCGATGCTATGACTTCTGCTATCGAAGAATTAACGGCTATAACTCGCTATCTAAAAG TACTTGGTTGCTATCCAATTGAAAATGTAGAACCAACAGCTATTCCATTATCAAATTGA
Upstream 100 bases:
>100_bases ATTCTTAAGAACAGCGCTCATTTGAGCGCTGTTTTTTCTTGACGCAAACTAACCAATTCCTTATTGTGAATTAACTCTTA ATTTACTAGGTTTGCATTTC
Downstream 100 bases:
>100_bases TTACATCGAATAAAAGGTAAACATGAAAGTTATCATTGCTTCTCAAAACCCAGCGAAGATTGCCGCTGTTGAATCAGCAT TTAATCTTGCGTTTCCTAAT
Product: fused chorismate mutase P/prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTDTHYSLDDIRLRLNELDNELLKLFSERRKLSLDVAKSKVKTAKPVRDPKREQQLLVKLIENGKDFDLDAYYITQLFHT IIEDSVLLQQEYFQNLANPDLSRKPVARVAYLGSKGSYSNLASRRYFSKKNIELAELGCENFKEVIKTVESGHADYGVLP IENTSSGSINQVYDLLQHTSLYIVGELTQKIDHCLLTTTETSLESIKTLYSHPQPHEQCSEFLNRLNNVELISCASTADA MITVKELNSPEVAAIGNSDSGKLYGLQSLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTAQDAGSLVESLLV LQKYGINMSKLESRPIMGNPWEEMFYVDLEAHLKSDAMTSAIEELTAITRYLKVLGCYPIENVEPTAIPLSN
Sequences:
>Translated_392_residues MTDTHYSLDDIRLRLNELDNELLKLFSERRKLSLDVAKSKVKTAKPVRDPKREQQLLVKLIENGKDFDLDAYYITQLFHT IIEDSVLLQQEYFQNLANPDLSRKPVARVAYLGSKGSYSNLASRRYFSKKNIELAELGCENFKEVIKTVESGHADYGVLP IENTSSGSINQVYDLLQHTSLYIVGELTQKIDHCLLTTTETSLESIKTLYSHPQPHEQCSEFLNRLNNVELISCASTADA MITVKELNSPEVAAIGNSDSGKLYGLQSLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTAQDAGSLVESLLV LQKYGINMSKLESRPIMGNPWEEMFYVDLEAHLKSDAMTSAIEELTAITRYLKVLGCYPIENVEPTAIPLSN >Mature_391_residues TDTHYSLDDIRLRLNELDNELLKLFSERRKLSLDVAKSKVKTAKPVRDPKREQQLLVKLIENGKDFDLDAYYITQLFHTI IEDSVLLQQEYFQNLANPDLSRKPVARVAYLGSKGSYSNLASRRYFSKKNIELAELGCENFKEVIKTVESGHADYGVLPI ENTSSGSINQVYDLLQHTSLYIVGELTQKIDHCLLTTTETSLESIKTLYSHPQPHEQCSEFLNRLNNVELISCASTADAM ITVKELNSPEVAAIGNSDSGKLYGLQSLITNISNQTENQTRFIVVARKPVDVSEQIPAKTTLIMSTAQDAGSLVESLLVL QKYGINMSKLESRPIMGNPWEEMFYVDLEAHLKSDAMTSAIEELTAITRYLKVLGCYPIENVEPTAIPLSN
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=378, Percent_Identity=54.4973544973545, Blast_Score=414, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6324013, Length=305, Percent_Identity=23.2786885245902, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 44031; Mature: 43899
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHYSLDDIRLRLNELDNELLKLFSERRKLSLDVAKSKVKTAKPVRDPKREQQLLVKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IENGKDFDLDAYYITQLFHTIIEDSVLLQQEYFQNLANPDLSRKPVARVAYLGSKGSYSN HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCHHH LASRRYFSKKNIELAELGCENFKEVIKTVESGHADYGVLPIENTSSGSINQVYDLLQHTS HHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCH LYIVGELTQKIDHCLLTTTETSLESIKTLYSHPQPHEQCSEFLNRLNNVELISCASTADA HEEEHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCC MITVKELNSPEVAAIGNSDSGKLYGLQSLITNISNQTENQTRFIVVARKPVDVSEQIPAK EEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCC TTLIMSTAQDAGSLVESLLVLQKYGINMSKLESRPIMGNPWEEMFYVDLEAHLKSDAMTS CEEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHEEEEHHHHHHHHHHHH AIEELTAITRYLKVLGCYPIENVEPTAIPLSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDTHYSLDDIRLRLNELDNELLKLFSERRKLSLDVAKSKVKTAKPVRDPKREQQLLVKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IENGKDFDLDAYYITQLFHTIIEDSVLLQQEYFQNLANPDLSRKPVARVAYLGSKGSYSN HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCHHH LASRRYFSKKNIELAELGCENFKEVIKTVESGHADYGVLPIENTSSGSINQVYDLLQHTS HHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCH LYIVGELTQKIDHCLLTTTETSLESIKTLYSHPQPHEQCSEFLNRLNNVELISCASTADA HEEEHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCC MITVKELNSPEVAAIGNSDSGKLYGLQSLITNISNQTENQTRFIVVARKPVDVSEQIPAK EEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHCCCCC TTLIMSTAQDAGSLVESLLVLQKYGINMSKLESRPIMGNPWEEMFYVDLEAHLKSDAMTS CEEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHEEEEHHHHHHHHHHHH AIEELTAITRYLKVLGCYPIENVEPTAIPLSN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561; 1444388 [H]