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The map label for this gene is yjjX [C]

Identifier: 59711167

GI number: 59711167

Start: 608689

End: 609201

Strand: Reverse

Name: yjjX [C]

Synonym: VF_0560

Alternate gene names: 59711167

Gene position: 609201-608689 (Counterclockwise)

Preceding gene: 59711168

Following gene: 59711164

Centisome position: 21.02

GC content: 38.6

Gene sequence:

>513_bases
ATGAAAGTTATCATTGCTTCTCAAAACCCAGCGAAGATTGCCGCTGTTGAATCAGCATTTAATCTTGCGTTTCCTAATGA
TACTTTTTCATTTGAAGGGGTATCAGTAAAGAGCGGTGTTCCAGATCAACCAATGAGTTGTGAAGAAACAAAACAAGGAG
CAATGAACCGTATTAATAACGCAAAGATCAAGCTACCTAACTGTGATTATTATGTTGGGTTAGAAGCTGGAATTGAAGGT
AATTCTACTTTCGCTTGGATGATTATTGATAATGGTTTAACGGTAGGAGAGTCACGCTCTTCGAGTTTACCTCTCCCACC
ACAAGTTATTGATGAGGTGAAAAAAGGTAAAGAGCTAGGCGATGTCATGGATGAACAATTTAACACCGACAACATTAAAC
AGAAAGGAGGGGCTATTGGCTTACTAACCAATAACCTACTAACAAGAACATCGGTATATCAACAAGCGCTTATTCTTGCT
CTTATTCCTTTTCTACATCCAACTCGCTTTTAG

Upstream 100 bases:

>100_bases
ATAACTCGCTATCTAAAAGTACTTGGTTGCTATCCAATTGAAAATGTAGAACCAACAGCTATTCCATTATCAAATTGATT
ACATCGAATAAAAGGTAAAC

Downstream 100 bases:

>100_bases
TACTCTTTTCTAATAAATCCATAAGCCATACTTTCTCTTCATCAGTATGGCTTTTTAATTCATTTGAACCTCGAGTGATT
GTGGCAACGCCCACACCTAA

Product: NTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKVIIASQNPAKIAAVESAFNLAFPNDTFSFEGVSVKSGVPDQPMSCEETKQGAMNRINNAKIKLPNCDYYVGLEAGIEG
NSTFAWMIIDNGLTVGESRSSSLPLPPQVIDEVKKGKELGDVMDEQFNTDNIKQKGGAIGLLTNNLLTRTSVYQQALILA
LIPFLHPTRF

Sequences:

>Translated_170_residues
MKVIIASQNPAKIAAVESAFNLAFPNDTFSFEGVSVKSGVPDQPMSCEETKQGAMNRINNAKIKLPNCDYYVGLEAGIEG
NSTFAWMIIDNGLTVGESRSSSLPLPPQVIDEVKKGKELGDVMDEQFNTDNIKQKGGAIGLLTNNLLTRTSVYQQALILA
LIPFLHPTRF
>Mature_170_residues
MKVIIASQNPAKIAAVESAFNLAFPNDTFSFEGVSVKSGVPDQPMSCEETKQGAMNRINNAKIKLPNCDYYVGLEAGIEG
NSTFAWMIIDNGLTVGESRSSSLPLPPQVIDEVKKGKELGDVMDEQFNTDNIKQKGGAIGLLTNNLLTRTSVYQQALILA
LIPFLHPTRF

Specific function: Unknown

COG id: COG1986

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0244 family

Homologues:

Organism=Escherichia coli, GI87082442, Length=163, Percent_Identity=48.4662576687117, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y560_VIBF1 (Q5E7E1)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_203943.1
- ProteinModelPortal:   Q5E7E1
- SMR:   Q5E7E1
- STRING:   Q5E7E1
- GeneID:   3278171
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0560
- NMPDR:   fig|312309.3.peg.609
- eggNOG:   COG1986
- HOGENOM:   HBG541017
- OMA:   ATFAYIA
- PhylomeDB:   Q5E7E1
- ProtClustDB:   PRK05074
- BioCyc:   VFIS312309:VF0560-MONOMER
- HAMAP:   MF_00648
- InterPro:   IPR002786
- TIGRFAMs:   TIGR00258

Pfam domain/function: PF01931 DUF84

EC number: NA

Molecular weight: Translated: 18476; Mature: 18476

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIIASQNPAKIAAVESAFNLAFPNDTFSFEGVSVKSGVPDQPMSCEETKQGAMNRINN
CEEEEECCCCCEEEEEHHHHEEECCCCCCEECCEEECCCCCCCCCCHHHHHHHHHHCCCC
AKIKLPNCDYYVGLEAGIEGNSTFAWMIIDNGLTVGESRSSSLPLPPQVIDEVKKGKELG
CEEECCCCCEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHCCHHHH
DVMDEQFNTDNIKQKGGAIGLLTNNLLTRTSVYQQALILALIPFLHPTRF
HHHHHCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVIIASQNPAKIAAVESAFNLAFPNDTFSFEGVSVKSGVPDQPMSCEETKQGAMNRINN
CEEEEECCCCCEEEEEHHHHEEECCCCCCEECCEEECCCCCCCCCCHHHHHHHHHHCCCC
AKIKLPNCDYYVGLEAGIEGNSTFAWMIIDNGLTVGESRSSSLPLPPQVIDEVKKGKELG
CEEECCCCCEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHCCHHHH
DVMDEQFNTDNIKQKGGAIGLLTNNLLTRTSVYQQALILALIPFLHPTRF
HHHHHCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA