Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is udk
Identifier: 57652002
GI number: 57652002
Start: 1694389
End: 1695012
Strand: Reverse
Name: udk
Synonym: SACOL1666
Alternate gene names: 57652002
Gene position: 1695012-1694389 (Counterclockwise)
Preceding gene: 57650494
Following gene: 57652001
Centisome position: 60.33
GC content: 33.49
Gene sequence:
>624_bases ATGAAAGCTACTACAATCATTGGCATAGCTGGTGGATCTGGCTCAGGAAAAACAACTGTAACTAACGAAATTATGAAAAA CTTAGAAGGTCATAGTGTCGCTTTACTTGCTCAAGATTACTATTATAAAGATCAAAAGCACTTGACTTTCGACGAGCGCC TAGAAACCAATTATGACCATCCATTTGCATTCGATAATGATTTATTAATTGAAAATCTTAAAGACTTGAAAAATGGTAAA GCAGTAGAAGTACCGACATATGATTATGCTAGTCATACAAGAAGTGACATTACCATTGATTTTAAACCTAAAGATGTTAT TATCGTAGAAGGCATTTTCGCTTTAGAAAATAAGGTATTACGTGATATGATGGATGTTAAAATATATGTTGATACAGATG CAGACTTGAGAATATTACGCCGTTTAACACGAGATACTAAAGAGCGTGGGCGTTCAATGGACTCTGTTATCAATCAATAT TTAAGTGTTGTTAGACCTATGCATGACCAATTTATTGAACCGACTAAGAAATATGCTGATATAATTATTCCTGAAGGTGG GAGCAATAAAGTTGCAATAGATATTATGACAACAAAAATTCAGTCTTTAGTTAGCAAGCAATAG
Upstream 100 bases:
>100_bases GTAACAGCTTAGACGCGGCGCGCCATCCATTACAAATCGTTCAAATTAAAGTGGATCGCCCGATATATCCAAACAACATG ATGAGAAAGGAAATTGGCTA
Downstream 100 bases:
>100_bases TATAATTCAGTAAAGGAAGATGACAATATGGAAAATCAAAAGCAATATCCAATGACTCAAGAAGGTTTTGAAAAATTAGA GCGTGAACTTGAAGAATTAA
Product: uridine kinase
Products: NA
Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGK AVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
Sequences:
>Translated_207_residues MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGK AVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ >Mature_207_residues MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGK AVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQY LSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
Specific function: Pyrimidine salvage pathway. [C]
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uridine kinase family
Homologues:
Organism=Homo sapiens, GI18699734, Length=211, Percent_Identity=40.2843601895735, Blast_Score=183, Evalue=7e-47, Organism=Homo sapiens, GI301129207, Length=203, Percent_Identity=45.320197044335, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI57863312, Length=209, Percent_Identity=44.9760765550239, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI13899253, Length=211, Percent_Identity=41.7061611374408, Blast_Score=174, Evalue=5e-44, Organism=Homo sapiens, GI209863022, Length=147, Percent_Identity=41.4965986394558, Blast_Score=117, Evalue=7e-27, Organism=Escherichia coli, GI87082034, Length=204, Percent_Identity=49.5098039215686, Blast_Score=218, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17539894, Length=204, Percent_Identity=41.1764705882353, Blast_Score=172, Evalue=9e-44, Organism=Caenorhabditis elegans, GI17539892, Length=204, Percent_Identity=41.1764705882353, Blast_Score=172, Evalue=9e-44, Organism=Caenorhabditis elegans, GI71981181, Length=219, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324339, Length=191, Percent_Identity=35.0785340314136, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320223, Length=125, Percent_Identity=30.4, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550449, Length=199, Percent_Identity=43.7185929648241, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI28573516, Length=199, Percent_Identity=43.7185929648241, Blast_Score=175, Evalue=1e-44, Organism=Drosophila melanogaster, GI28573514, Length=199, Percent_Identity=43.7185929648241, Blast_Score=175, Evalue=1e-44, Organism=Drosophila melanogaster, GI28573512, Length=199, Percent_Identity=43.7185929648241, Blast_Score=175, Evalue=1e-44, Organism=Drosophila melanogaster, GI24649624, Length=223, Percent_Identity=37.219730941704, Blast_Score=164, Evalue=4e-41, Organism=Drosophila melanogaster, GI221458995, Length=225, Percent_Identity=36.8888888888889, Blast_Score=164, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URK_STAA1 (A7X320)
Other databases:
- EMBL: AP009324 - RefSeq: YP_001442188.1 - ProteinModelPortal: A7X320 - SMR: A7X320 - STRING: A7X320 - EnsemblBacteria: EBSTAT00000004127 - GeneID: 5559152 - GenomeReviews: AP009324_GR - KEGG: saw:SAHV_1598 - eggNOG: COG0572 - GeneTree: EBGT00050000025242 - HOGENOM: HBG527126 - OMA: NQFVEPT - ProtClustDB: PRK05480 - BioCyc: SAUR418127:SAHV_1598-MONOMER - GO: GO:0005737 - HAMAP: MF_00551 - InterPro: IPR006083 - InterPro: IPR000764 - PANTHER: PTHR10285:SF6 - PRINTS: PR00988 - TIGRFAMs: TIGR00235
Pfam domain/function: PF00485 PRK
EC number: =2.7.1.48
Molecular weight: Translated: 23505; Mature: 23505
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH CCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCEECCCCCCCHHHHHCCCCCC PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECHHHHHHHHHH RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD HHHHHEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCC IIIPEGGSNKVAIDIMTTKIQSLVSKQ EEEECCCCCEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDH CCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCEECCCCCCCHHHHHCCCCCC PFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVL CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECHHHHHHHHHH RDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYAD HHHHHEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCC IIIPEGGSNKVAIDIMTTKIQSLVSKQ EEEECCCCCEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA