Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is yrrO [H]
Identifier: 57650494
GI number: 57650494
Start: 1695012
End: 1696280
Strand: Reverse
Name: yrrO [H]
Synonym: SACOL1667
Alternate gene names: 57650494
Gene position: 1696280-1695012 (Counterclockwise)
Preceding gene: 57650495
Following gene: 57652002
Centisome position: 60.38
GC content: 35.38
Gene sequence:
>1269_bases ATGAAGACAATAGAAGAGATTAAATCAACTCCTAAAACAGTTATGAAGAAACCAGAATTATTAGCACCTGCTGGAAACTT AGAAAAGTTAAAAATAGCAGTACATTATGGCGCTGATGCCGTATTTTTAGGTGGTCAAGAATATGGATTACGTTCAAATG CTGATAATTTCACGATGGAAGAAATAGCTGAAGGTGTTGAATTTGCGAACCGTTACGGTGCCAAAATTTATGTTACGACA AATATTATTGCACATGATGAGAATATTGAAGGTCTAGAATCATATTTGCGTAATTTGGAAAAGACTGGTGCGACAGGTAT CATTGTTGCAGATCCTTTAATTATCGAAACATGTAAAGAAGTTGCGCCAAAACTTGAAATTCATTTATCTACTCAACAAT CACTTTCTAATTACAAAGCTGTAGAATATTGGAAAGAAGAAGGATTGGATCGTGTTGTATTAGCACGTGAGACCGGCGCG ATGGAAATGCGTGAAATGAAGGAAAAAGTAGATATTGAAATCGAAGCATTTATTCATGGTGCTATGTGTATCGCCTATTC AGGTAGATGTACATTAAGTAATCATATGACTGCAAGGGATTCCAACAGAGGCGGTTGCTGTCAAAGTTGCCGTTGGGATT ATGAATTATTAGAAGTTGATGATAATGGTGAACTTGATGTTTTTTATAATCAAGGTGAAGTTACACCGTTTGCGATGAGT CCTAAAGATTTAAAATTAATCGAATCAATTCCTCAAATGATGGATATTGGTGTGGACTCATTAAAAATTGAAGGACGTAT GAAGTCAATTCATTATATTGCAACAGTTGTCTCAGTATATCGTAAAGTCATTGATGCGTATGCGGCAGATCCTGACAACT TTAAGATTAATCCGGAATGGTTAATAGAGTTAGATAAATGTGCAAATAGAGACACTGCACCAGCATTCTTTGAGGGAACA CCTGGTTATGAAGAACAGATGTTTGGTCAACAACAATCTAAAAAATCATCATTTGATTTTTGTGGTTTGGTATTAGACTA TAATGAAGATACAAAAATTGCGACTATTCAACAACGAAATAACTTTAAACCAGGTCAAGAAATAGAATTCTTTGGTCCAG AAATTGAAACATTTACACAAGTAGTAGAAGCAATTTATGATGAAGAAGGTAACAGCTTAGACGCGGCGCGCCATCCATTA CAAATCGTTCAAATTAAAGTGGATCGCCCGATATATCCAAACAACATGATGAGAAAGGAAATTGGCTAA
Upstream 100 bases:
>100_bases AATTTATGTTGATGGATCCAATTGAAGAAATTCAACCTGATCATCGACCATTTGACGAAGGTTTCTTATATAAACAAACA GTATATTAAGGAGGTTAATC
Downstream 100 bases:
>100_bases TGAAAGCTACTACAATCATTGGCATAGCTGGTGGATCTGGCTCAGGAAAAACAACTGTAACTAACGAAATTATGAAAAAC TTAGAAGGTCATAGTGTCGC
Product: U32 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT PGYEEQMFGQQQSKKSSFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL QIVQIKVDRPIYPNNMMRKEIG
Sequences:
>Translated_422_residues MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT PGYEEQMFGQQQSKKSSFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL QIVQIKVDRPIYPNNMMRKEIG >Mature_422_residues MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT PGYEEQMFGQQQSKKSSFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL QIVQIKVDRPIYPNNMMRKEIG
Specific function: Unknown
COG id: COG0826
COG function: function code O; Collagenase and related proteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U32 family [H]
Homologues:
Organism=Escherichia coli, GI1788397, Length=403, Percent_Identity=33.2506203473945, Blast_Score=211, Evalue=6e-56, Organism=Escherichia coli, GI87081910, Length=268, Percent_Identity=39.9253731343284, Blast_Score=196, Evalue=3e-51, Organism=Escherichia coli, GI1789548, Length=311, Percent_Identity=30.8681672025724, Blast_Score=152, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001539 [H]
Pfam domain/function: PF01136 Peptidase_U32 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 47646; Mature: 47646
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS01276 PEPTIDASE_U32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTME CCCHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHH EIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKE HHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH VAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMREMKEKVDIEIEAFIHG HCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEEHEEEE AMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEW CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH LIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSKKSSFDFCGLVLDYNEDTKIATIQQRN EEEEHHHCCCCCCCCEECCCCCHHHHHHCHHHHCCCCCCEEEEEEEECCCCEEEEEECCC NFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPLQIVQIKVDRPIYPNNMMRKE CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHH IG CC >Mature Secondary Structure MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTME CCCHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHH EIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKE HHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH VAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMREMKEKVDIEIEAFIHG HCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEEHEEEE AMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEW CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH LIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSKKSSFDFCGLVLDYNEDTKIATIQQRN EEEEHHHCCCCCCCCEECCCCCHHHHHHCHHHHCCCCCCEEEEEEEECCCCEEEEEECCC NFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPLQIVQIKVDRPIYPNNMMRKE CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHH IG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]