Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
---|---|
Accession | NC_002951 |
Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is yqhM [H]
Identifier: 57651927
GI number: 57651927
Start: 1624208
End: 1625038
Strand: Reverse
Name: yqhM [H]
Synonym: SACOL1591
Alternate gene names: 57651927
Gene position: 1625038-1624208 (Counterclockwise)
Preceding gene: 57651929
Following gene: 57651924
Centisome position: 57.84
GC content: 34.78
Gene sequence:
>831_bases ATGACTGAAACTTGGAATTTTATTAATACAGGAAGTAAAGACCCATATTATAATATGGCAATGGATGAAGCGTTATTAAA TTTTGTCTCTAGAGGTGAAATTGATCCAGTTATACGTTTTTACACATGGAATCCTGCAACATTATCAATAGGGTATTTCC AAAGGCTACAAAAAGAAATTGATATTGATAAGGTTAAAGAGAAAGGTTTTGGTCTCGTAAGGCGTCAAACTGGTGGCCGT GGGGTGCTACATGATAAAGAGTTAACTTACAGTGTGATTGTGCCTGAATCGCATCCGAATATGCCTTCTACAGTTACAGA AGCGTACAGAGTGATTTCACAAGGATTATTAGAAGGATTTAAAAACTTAGGATTTGATACTTATTTTGCGGTACCTAAAA CGCCTGAAGAGCGTCAAAAATTAAAACAACCTCGAAGTTCAGTGTGTTTTGATGCACCAAGTTGGTATGAGCTAGTTGTT GAAGGCCGTAAGATTGCTGGGAGTGCTCAAACGAGACAAAAGGGCGTAATCCTCCAACACGGTTCGATTTTACAAGATAT TGATATTGATGAACTGTTTGATATGTTTATTTATAAAAATGAAAGATTAAAATTAAAAATGAAAGAGGCATTCGTTGAAA AAGCAGTTGCCATCAATGATATTTCAGATGAACACATTACTATTAGTCAAATGGAAGAAGCTTTCGAGAAAGGTTTTAAG AAAGGTTTAAATATAGAATTAAAGCCACTTGAATTAACAGAAGCTCAATTGGCAGAAGTGGAAGAATTAACTGAAAAATA TCGTTCAGATGAATGGATGTTTAGAAAGTAG
Upstream 100 bases:
>100_bases CAAAATATTTCACTAAAGAATTGCAATTATTATTCATTTAGTTAAATTGATTAATTAGCGAATCAAATATTATACATTTT GCTGATAGGAGTTCTTGAAT
Downstream 100 bases:
>100_bases TTTTTAGAATAAAAAATGGAAGCACGTAGACTATTTTACCTACAAGTGCTTCCGTTTTTTTATCTATTTTCTTCTTTGAT TTCTTTTATACTTACGCATT
Product: lipoate-protein ligase A family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGR GVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVV EGRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
Sequences:
>Translated_276_residues MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGR GVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVV EGRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK >Mature_275_residues TETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEIDIDKVKEKGFGLVRRQTGGRG VLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGFKNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVE GRKIAGSAQTRQKGVILQHGSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFKK GLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK
Specific function: Unknown
COG id: COG0095
COG function: function code H; Lipoate-protein ligase A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004143 [H]
Pfam domain/function: PF03099 BPL_LipA_LipB [H]
EC number: NA
Molecular weight: Translated: 31882; Mature: 31751
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHC DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF CHHHHHHHCCCEEEECCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH HHCCCCEEEECCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCHHCCCCHHHHCCEEEEC GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK CCCHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TETWNFINTGSKDPYYNMAMDEALLNFVSRGEIDPVIRFYTWNPATLSIGYFQRLQKEI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHC DIDKVKEKGFGLVRRQTGGRGVLHDKELTYSVIVPESHPNMPSTVTEAYRVISQGLLEGF CHHHHHHHCCCEEEECCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH KNLGFDTYFAVPKTPEERQKLKQPRSSVCFDAPSWYELVVEGRKIAGSAQTRQKGVILQH HHCCCCEEEECCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCHHCCCCHHHHCCEEEEC GSILQDIDIDELFDMFIYKNERLKLKMKEAFVEKAVAINDISDEHITISQMEEAFEKGFK CCCHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH KGLNIELKPLELTEAQLAEVEELTEKYRSDEWMFRK CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]