Click here to switch to the map view.

The map label for this gene is fliY [C]

Identifier: 57650957

GI number: 57650957

Start: 2471316

End: 2472095

Strand: Reverse

Name: fliY [C]

Synonym: SACOL2412

Alternate gene names: 57650957

Gene position: 2472095-2471316 (Counterclockwise)

Preceding gene: 57650958

Following gene: 57650956

Centisome position: 87.99

GC content: 32.05

Gene sequence:

>780_bases
ATGAAAAGACTTTTATTTGTGATGATAGCTTTCGTTTTCATATTGGCTGCATGCGGAAACAATTCGTCGAAAGACAAGGA
AGCTAGTAAAGATAGCAAGACAATTAATGTTGGGACTGAGGGGACTTATGCACCATTTAGTTTCCACGATAAAGATGGTA
AATTAACTGGTTACGATATTGATGTTATTAAAGCAGTGGCTAAAGAAGAAGGTTTAAAACTTAAATTTAATGAAACTTCT
TGGGATTCTATGTTTGCAGGTTTAGACGCAGGGCGTTTTGATGTAATCGCGAACCAAGTAGGTATTAATCCTGATAGAGA
AAAGAAATATAAATTTTCTAAGCCTTACACATTCTCAAGTGCTGTTTTAGTTATTCGTGAAAATGAAAAAGATATTAAAG
ATTTTGATGATGTTAAAGGTAAGAAGTTAGCACAAACATTCACATCTAATTATGGTAAATTAGCTAAGGATAAAGGTGCT
GATATTACAAAAGTTGATGGCTTTAACCAATCAATGGATTTATTATTGTCTAAGCGTGTTGATGGTACATTTAATGATAG
TCTGTCATACTTGGATTATAAAAAACAAAAACCTAATGCTAAGATCAAAGCAATCAAAGGTAATGCTGAACAAAGTAGAT
CTGCATTTGCATTTTCTAAAAAAGCAGATGATGAAACAGTTCAAAAATTCAATGATGGCTTGAAAAAAATCGAGGAAAAC
GGTGAATTAGCTAAAATAGGTAAGAAATGGTTTGGTCAAGATGTTTCTAAATCTAAATAG

Upstream 100 bases:

>100_bases
AAAGCTTTTTAGCAAAAGTTCAACATATTGACTTATCCGGCATTTCAGATTAAAATATTTTTATTCCGATTAGAATAATA
AGAATAAGGAGATATATTCT

Downstream 100 bases:

>100_bases
TGAACAACAACATGCGCTAGATGCTGCAAAACAAGCTTTCGGACCTATGCTAGAAGGTTTGGTCAAATATTCAATTCCTA
TTACATTAGTTACATTTGTT

Product: amino acid ABC transporter amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK

Sequences:

>Translated_259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK
>Mature_259_residues
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETS
WDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGA
DITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEEN
GELAKIGKKWFGQDVSKSK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=231, Percent_Identity=37.6623376623377, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787085, Length=223, Percent_Identity=26.9058295964126, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787088, Length=258, Percent_Identity=27.5193798449612, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787031, Length=257, Percent_Identity=28.0155642023346, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=25.3218884120172, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=24.5614035087719, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28904; Mature: 28904

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDI
CHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCCCCCCCCEEECCCCCEECCHH
DVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHCEECCCCCEECC
AVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRV
EEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
DGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEEN
CCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
GELAKIGKKWFGQDVSKSK
CCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRLLFVMIAFVFILAACGNNSSKDKEASKDSKTINVGTEGTYAPFSFHDKDGKLTGYDI
CHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCCCCCCCCEEECCCCCEECCHH
DVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSS
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHCEECCCCCEECC
AVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRV
EEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
DGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEEN
CCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
GELAKIGKKWFGQDVSKSK
CCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]