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The map label for this gene is yrrN [H]

Identifier: 57650495

GI number: 57650495

Start: 1696292

End: 1697215

Strand: Reverse

Name: yrrN [H]

Synonym: SACOL1668

Alternate gene names: 57650495

Gene position: 1697215-1696292 (Counterclockwise)

Preceding gene: 57650496

Following gene: 57650494

Centisome position: 60.41

GC content: 33.87

Gene sequence:

>924_bases
ATGACAGAATTACTTGTCACACCCAAGTCATTAAGCCATATGGAAACACTTATTGATTTAGGTGCAGATGCTTTTGTAAT
TGGCGAGCAAAAGTTTGGTTTAAGACTTCCAGGGGAATTCAATAGACAACAAATGACAGAGGCTGTCGCATTAGCTCACA
AAAACGATAAAAAAGTATATGCGGCAGTGAATGGATTATTTCATAATTATCATTTAGATGCTGTAGAAGATTATATTAAT
TTTTTACATGAAATACGAGTTGACAGAATTATTTTCGGGGATCCAGCAGTAGTAATGTATGTGAAGGCGCAAGAAAATCC
AATACCACTTCATTGGAATGCAGAGACGTTAGTAACTAATCATTTTCAATGTAATTACTGGGGTAAAAGAGGCGCATCAA
GAGCTGTCTTAGCACGTGAGCTGAATTTGGATGAAATTATTAATATAAAAGAAAATTCAAATGTGGAAATTGAGGTGCAA
GTTCAAGGAATGACTTGTATGTTTCAATCAAAGCGTATGCTACTAGGCAATTATTATACGTTCCAAGATCGCCAAATGAA
AATTGAACGTCGCAATGATGAACAATCTTTATTACTTTATGATGAAGAAAGACAAAATAATTACCCAGTTTACGAAGATT
ACAATGGTACGCACATTATGTCACCAAACGACATTTGTTTAATTGAAGAATTAGCACCATTTTTTGAGGCGGGTATAGAT
TCATTTAAAATCGATGGTATTCTACAAACGGAAGAATATATTAATGTGGTAACGGAACAGTATCGTCAAGCGATAGATTT
GTACAATGAAGATCCTGAAATCTATGAAGATGAGAAATTTATGTTGATGGATCCAATTGAAGAAATTCAACCTGATCATC
GACCATTTGACGAAGGTTTCTTATATAAACAAACAGTATATTAA

Upstream 100 bases:

>100_bases
TTCAAGATTATAATGAGTGGTTAATAAAGCAACCAGGATATACAACGAATTTTTTAAATATAGACGATGGATTAGCGATT
TCAATTAAAGGAGAATGACT

Downstream 100 bases:

>100_bases
GGAGGTTAATCATGAAGACAATAGAAGAGATTAAATCAACTCCTAAAACAGTTATGAAGAAACCAGAATTATTAGCACCT
GCTGGAAACTTAGAAAAGTT

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYIN
FLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQ
VQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGID
SFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY

Sequences:

>Translated_307_residues
MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYIN
FLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQ
VQGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGID
SFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY
>Mature_306_residues
TELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVYAAVNGLFHNYHLDAVEDYINF
LHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTNHFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQV
QGMTCMFQSKRMLLGNYYTFQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGIDS
FKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGFLYKQTVY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=345, Percent_Identity=27.2463768115942, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI87081910, Length=267, Percent_Identity=27.7153558052434, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789548, Length=301, Percent_Identity=23.9202657807309, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35959; Mature: 35828

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVY
CCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEE
AAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTN
EEEHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCCCEEEEECCHHEEEC
HFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQVQGMTCMFQSKRMLLGNYYT
CEEEECCCCCCCCHHHHHHHCCHHHEEEECCCCCEEEEEEECCEEEEEECCCEEECCEEE
FQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGID
ECCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHHCCCC
SFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGF
CEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCC
LYKQTVY
EEEEECC
>Mature Secondary Structure 
TELLVTPKSLSHMETLIDLGADAFVIGEQKFGLRLPGEFNRQQMTEAVALAHKNDKKVY
CCEEECCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEE
AAVNGLFHNYHLDAVEDYINFLHEIRVDRIIFGDPAVVMYVKAQENPIPLHWNAETLVTN
EEEHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCCCEEEEECCHHEEEC
HFQCNYWGKRGASRAVLARELNLDEIINIKENSNVEIEVQVQGMTCMFQSKRMLLGNYYT
CEEEECCCCCCCCHHHHHHHCCHHHEEEECCCCCEEEEEEECCEEEEEECCCEEECCEEE
FQDRQMKIERRNDEQSLLLYDEERQNNYPVYEDYNGTHIMSPNDICLIEELAPFFEAGID
ECCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHHCCCC
SFKIDGILQTEEYINVVTEQYRQAIDLYNEDPEIYEDEKFMLMDPIEEIQPDHRPFDEGF
CEEECEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCC
LYKQTVY
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]