| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238120
Identifier: 57238120
GI number: 57238120
Start: 1296612
End: 1297106
Strand: Reverse
Name: 57238120
Synonym: CJE1383
Alternate gene names: NA
Gene position: 1297106-1296612 (Counterclockwise)
Preceding gene: 57238129
Following gene: 57238119
Centisome position: 72.96
GC content: 23.64
Gene sequence:
>495_bases ATGGGAAAAAGAAATAATATTAAGATGACTAAAAACGCTAGTGCTGTTATTAATGAATTGATGGATAAACCTCATTATAA GCCTTTAAAAACCTTATTTTTTTGCAAAGATTTTTTAAGTTCTTTTCCGCTTGCTAAGCAACGTTTGATTGCTAAAATTT ATGTAAAAAATCATATTTTAAATATAATAACCTTACATCCAGCAGCTTATCAAGAATTAAATCATGATGATAGCAAAATT TATATTAAATTTCTCATAAAAGCATATGGACAAAAATATCCTTTAAGTGGATTTGTTGATATAAAAGATATAAAAATCTT TTCTCAAAAATACACTTATACGGTAAATAAAAACAAAAATGATGAAAAACTCTCTAAAAATTCTTATTTGGAGCTTTCTA AGGGTGAATTTAAAAATTGCTTTGAAGATAAAAAATTATTTAAGAAATTTGAAGATTTAAGAGAGCTTATAAAAAAAGGT TCTAATCTTGATTAA
Upstream 100 bases:
>100_bases TTTTTACCGAACCATTTTGTTCATAGCTTGTGTATTGAGGGTTGCCTTTATATCCGCAAGCACAGAAGAAAATTAAGAAA AGAAATGCTAAAATCATCTT
Downstream 100 bases:
>100_bases AGAGAATTTAGAAAATGAGTTAAAAACTCTTCCCAATAGTGCTGGAGTGTATCAATATTTTAATCAAGAAGGAAAGCTTT TATATGTAGGCAAGGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKI YIKFLIKAYGQKYPLSGFVDIKDIKIFSQKYTYTVNKNKNDEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIKKG SNLD
Sequences:
>Translated_164_residues MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKI YIKFLIKAYGQKYPLSGFVDIKDIKIFSQKYTYTVNKNKNDEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIKKG SNLD >Mature_163_residues GKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIY IKFLIKAYGQKYPLSGFVDIKDIKIFSQKYTYTVNKNKNDEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIKKGS NLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19282; Mature: 19151
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKIYVKNHIL CCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIKDIKIFSQKYTYTVNKNKN HHEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHEEHHHEEEEECCCCC DEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIKKGSNLD HHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKIYVKNHIL CCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIKDIKIFSQKYTYTVNKNKN HHEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHEEHHHEEEEECCCCC DEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIKKGSNLD HHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA