| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57238129
Identifier: 57238129
GI number: 57238129
Start: 1307062
End: 1307724
Strand: Reverse
Name: 57238129
Synonym: CJE1392
Alternate gene names: NA
Gene position: 1307724-1307062 (Counterclockwise)
Preceding gene: 57238132
Following gene: 57238120
Centisome position: 73.56
GC content: 30.47
Gene sequence:
>663_bases ATGGAAATGATTTTATTTGTTTTAGTGATGATTTTACTTGTACTTTTGTTTGTAGTGCTTTTTAGGCAGTATAAAAGCCC TAAAATAGAAGAAAAAAGCACGCAAAGTTTTAGCGATATCATGCAGCTTAAATCCATAGGAGAATTAAGTGTTTTTCAAG TTTTTAGTAAAGAGATTGTCACTAAAAAAGATAGCGCTTTTAATGGAATTTGGAAAAATCTTTTAGGATGGTCTTTGAGT GAAAGACAGATTGCTTTGATTTTTGAATTTGAGATCACTTTCTTGTATGATTTAAGGGATAAAAACTTTGATATTTTGCC TTTAGGGGACGATGCTTATAAGATCATCATGCCAGAGTGTAGATACAAACACAGCATCATAGATATGAAATTTTATGATG AAAAAAATGCTAAATTTTTACCTTTTTTACTGCCTGATTCTATCAATAGTACGGGGATTAGTTTTAGCGAAAGTGATAAA AACAAACTCATAAAAGAAGCCAAAGATGAGGTTAAAGACTTGTCTTTAAATCTTATCCAAAATTTAGAAAGCAAAATTCA TAAAAGTGCTAAGGATACTTTAGAAGCTATTGCTAAAGGTTTTGGAGCTAAGAGAGTGGAATTTGAATTCAAGGATAACA CGCAAAAGCTAGATATTAACTAG
Upstream 100 bases:
>100_bases TTGTGTGTTTGATTTTTATCATTAATGCTTTTATTTTCTTAGCGTTTGAGAAAAAATATATCTTTTCAAATCAAGGTTTA TAAATTTAGAAAGGTTTAAA
Downstream 100 bases:
>100_bases CTTTTTTCTTGTTTTACTTTTTTTTGGGGGGGGGGGTAATGCTTAGTTTGTTATTTTGTAAATTTTTTGATTATTTCATA GTTTTGCAAAAGCTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKSIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLS ERQIALIFEFEITFLYDLRDKNFDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDIN
Sequences:
>Translated_220_residues MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKSIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLS ERQIALIFEFEITFLYDLRDKNFDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDIN >Mature_220_residues MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKSIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLS ERQIALIFEFEITFLYDLRDKNFDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25530; Mature: 25530
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKSIGELSVFQVFSKEIV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKNFDILPLGDDAYKIIMPEC HCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEECCCC RYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDKNKLIKEAKDEVKDLSLNLIQ CCHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDIN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCC >Mature Secondary Structure MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKSIGELSVFQVFSKEIV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKNFDILPLGDDAYKIIMPEC HCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEECCCC RYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDKNKLIKEAKDEVKDLSLNLIQ CCHHHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDIN HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA