Definition | Campylobacter jejuni RM1221, complete genome. |
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Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is arsB [H]
Identifier: 57238059
GI number: 57238059
Start: 1234739
End: 1236025
Strand: Reverse
Name: arsB [H]
Synonym: CJE1321
Alternate gene names: 57238059
Gene position: 1236025-1234739 (Counterclockwise)
Preceding gene: 57238060
Following gene: 57238058
Centisome position: 69.52
GC content: 26.96
Gene sequence:
>1287_bases ATGCTTGCTTTTTTTATTTTTTTATCTACTTTAGTTTTACTTTTTTGGCGTCCATGGAATTTACCTATTTGGGTATTTTC TAGCTTGGGGGCTTTTTTTGTTTTTATTTTTCAATTGGTAGATTTTAAAGATGCTTGTTTTGTTTTTTCTTTGGTTTGGG ATAGTTCTTTAACTTTGGTTGGGTTGATTATCCTTTCTTTTAGCTTGGAAGCTTTGGGATTTTTTGATTTTATTGCGAGT AAAATTTTGTATTTTTCTAGAGAGAAAAATCAAGAAAAAATTTATATCAGTACAAAAAAAATGATGTTATTTTTGTTGAT TTTTGTATTTTTTCTTTCTGCATTTTTTGCTAACGATGGAGCGATTTTAATCATTACACCTATTATTATAGCTTTATTTT CAACTCTTAAAGATTGTAAAAATCATGCTTTTATTTTAAGTTCTTTTTTACTTAGCCTTTCTTTTTTATGTGATGCAAGT TCAAACGCTTTGGTTATTTCAAATTTAACCAATATCATCACAGCAAATTATTTTAAGATAGAATTTTTAGAATTTGCTAA AAATATGTTTTTGCCAAATTTTTTTGTTTTGCTTTCTACTATAGTTACGGTTTTTGTGCTTTATGTGAGAGTTTTACCTA AAAGGCTTGAATTTAAATTAATCAAAAAAGAGCAAATTTCATTGAAATTGTTTTTTCTTTGCATAGTATTTTTATTTCTT TTTGTTATCAGTTTTTTTATAGGTGAAATTTTTAATATTAAAATAAGTTTTTTTGCTTTGCTTTGGGCGGGAATTTTTTG GCTTATTATTTTAAAAATTCAAGGTAAAAAAAGTATTAAAATTCTTTTTGAAGCACCTTATGGAGTTTTGCTTTTTAGTT TTGGGCTTTATATGGTGGTTTTTGCTTTACATAAAATAGGTGTGAGTGAAATTTTGGTTAAAAGCTATGCTTTTTTGATG CAAGATAAGAGTGGAATTTTTGGTGTGGCTTTGATTTCAGCTTTTGGATCTTCTGTGTTTAATAATTTGCCTATGGTTTT AATCGGAGATTTGGCATTAAAAGAATATTTTGAGAATTTTTCTTTTGATTCTTTGATGATTTATGCACATCTTTTAGGTG TAAATATAGGTCCAAAACTTACGCCAATAGGTTCTTTAGCAACTTTGCTTTGGCTTGGAGTTTTGGCTAGAAAAGGCATT AATATTTCTTTTTGGCAATATTGTAAATTTGGCTTTTTGATAACTTTACCTGTGCTTGTTTTTTCTCTTTTTGCTCTTAT TGTCTAA
Upstream 100 bases:
>100_bases ACCGCCAACCATTTTTGCTGCAAGTCAAATCAGTGGAATCACTCCTGCAGCGTTAGATATTTTACAAATTTATATCAAAA TGCAAAAGAAAAAAGTTTAA
Downstream 100 bases:
>100_bases ATATCAAAACTTGTTAAACAAAGAAAAAATTTATTTTAATTTCGATAAACTTTTAACTTGGTTAAAAAATAAAATCGAAA GGAGCAAGTTATGGCTACAT
Product: arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDACFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIAS KILYFSREKNQEKIYISTKKMMLFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEFKLIKKEQISLKLFFLCIVFLFL FVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLM QDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGI NISFWQYCKFGFLITLPVLVFSLFALIV
Sequences:
>Translated_428_residues MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDACFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIAS KILYFSREKNQEKIYISTKKMMLFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEFKLIKKEQISLKLFFLCIVFLFL FVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLM QDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGI NISFWQYCKFGFLITLPVLVFSLFALIV >Mature_428_residues MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDACFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIAS KILYFSREKNQEKIYISTKKMMLFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEFKLIKKEQISLKLFFLCIVFLFL FVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLM QDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGI NISFWQYCKFGFLITLPVLVFSLFALIV
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=431, Percent_Identity=32.9466357308585, Blast_Score=220, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 48840; Mature: 48840
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDACFVFSLVWDSSLTLV CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH GLIILSFSLEALGFFDFIASKILYFSREKNQEKIYISTKKMMLFLLIFVFFLSAFFANDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC AILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDASSNALVISNLTNIITANYFKI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHH EFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEFKLIKKEQISLKLFFLCIVFLFL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGVLLFSFGLYMVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHH FALHKIGVSEILVKSYAFLMQDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENF HHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGINISFWQYCKFGFLITLPVLV CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FSLFALIV HHHHHHHC >Mature Secondary Structure MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDACFVFSLVWDSSLTLV CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH GLIILSFSLEALGFFDFIASKILYFSREKNQEKIYISTKKMMLFLLIFVFFLSAFFANDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC AILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDASSNALVISNLTNIITANYFKI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCHHHH EFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEFKLIKKEQISLKLFFLCIVFLFL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGVLLFSFGLYMVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHH FALHKIGVSEILVKSYAFLMQDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENF HHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGINISFWQYCKFGFLITLPVLV CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FSLFALIV HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA