| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980764
Identifier: 55980764
GI number: 55980764
Start: 760561
End: 761013
Strand: Reverse
Name: 55980764
Synonym: TTHA0795
Alternate gene names: NA
Gene position: 761013-760561 (Counterclockwise)
Preceding gene: 55980768
Following gene: 55980762
Centisome position: 41.14
GC content: 65.78
Gene sequence:
>453_bases ATGGCCTACTGGCTCTTGAAGTCCGAACCCCAGGTGTACGGCATTGAGGACCTGGAGCGGGAAGGCCGGGCCATCTGGGA CGGGGTGCGGAACTACCAAGCCCGGAACTACCTGATGCAGATGAAAGAGGGCGACCTCTGCTTCTTCTACCACTCGGGCA CCACCCCCCCGGGGATCGCCGGGCGTTGCCGGGTGGTGCGCACCCTCCTCCCCGACCCCACCCAGTTTGACCCGGAAAGC CCCTACTACGACCCCAAGGCCACGCCGGAGAAGCCCCGCTGGTACACGGTGGAGGTGGCCTTCGTGGAGAAGTGGCCCCT CGTCCCCCTCGCCGAGCTCAAGGCCCTCTTCCCCCCGGACCACCCCCTCGTAAAAAGGGGAAACCGGCTTTCCGTGATGC CGGTTCCCCCGGAGGTGGCGGAAGCCCTTATTGTACGGAGAGGGTCCCGATGA
Upstream 100 bases:
>100_bases AAGGCGAGGAAAGACGCCACCAATCCCCTCATGCTTCCAAGATAGTTCCTTCCCCCCACCAGGGATGACAGCGAGGTGAA GCCTCCTTTAGACTTCCTCC
Downstream 100 bases:
>100_bases TCTTGAAGAGGGGCAGGAACATCCCGGCCACGATCATGCCCACGATGACGCCCAGGAAGATGATCATGAGGGGCTCAATG GCCGCGGTGAGGCTCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAYWLLKSEPQVYGIEDLEREGRAIWDGVRNYQARNYLMQMKEGDLCFFYHSGTTPPGIAGRCRVVRTLLPDPTQFDPES PYYDPKATPEKPRWYTVEVAFVEKWPLVPLAELKALFPPDHPLVKRGNRLSVMPVPPEVAEALIVRRGSR
Sequences:
>Translated_150_residues MAYWLLKSEPQVYGIEDLEREGRAIWDGVRNYQARNYLMQMKEGDLCFFYHSGTTPPGIAGRCRVVRTLLPDPTQFDPES PYYDPKATPEKPRWYTVEVAFVEKWPLVPLAELKALFPPDHPLVKRGNRLSVMPVPPEVAEALIVRRGSR >Mature_149_residues AYWLLKSEPQVYGIEDLEREGRAIWDGVRNYQARNYLMQMKEGDLCFFYHSGTTPPGIAGRCRVVRTLLPDPTQFDPESP YYDPKATPEKPRWYTVEVAFVEKWPLVPLAELKALFPPDHPLVKRGNRLSVMPVPPEVAEALIVRRGSR
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=157, Percent_Identity=40.1273885350318, Blast_Score=118, Evalue=2e-27, Organism=Homo sapiens, GI40806221, Length=157, Percent_Identity=40.1273885350318, Blast_Score=118, Evalue=2e-27, Organism=Homo sapiens, GI7661804, Length=157, Percent_Identity=40.1273885350318, Blast_Score=118, Evalue=2e-27, Organism=Homo sapiens, GI83267859, Length=104, Percent_Identity=45.1923076923077, Blast_Score=102, Evalue=8e-23, Organism=Homo sapiens, GI40806219, Length=104, Percent_Identity=45.1923076923077, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17287; Mature: 17156
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYWLLKSEPQVYGIEDLEREGRAIWDGVRNYQARNYLMQMKEGDLCFFYHSGTTPPGIA CEEEEECCCCCEECHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GRCRVVRTLLPDPTQFDPESPYYDPKATPEKPRWYTVEVAFVEKWPLVPLAELKALFPPD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCCC HPLVKRGNRLSVMPVPPEVAEALIVRRGSR CHHHHCCCEEEEEECCHHHHHHHHHHCCCC >Mature Secondary Structure AYWLLKSEPQVYGIEDLEREGRAIWDGVRNYQARNYLMQMKEGDLCFFYHSGTTPPGIA EEEEECCCCCEECHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC GRCRVVRTLLPDPTQFDPESPYYDPKATPEKPRWYTVEVAFVEKWPLVPLAELKALFPPD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCCC HPLVKRGNRLSVMPVPPEVAEALIVRRGSR CHHHHCCCEEEEEECCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA