Click here to switch to the map view.

The map label for this gene is 54293369

Identifier: 54293369

GI number: 54293369

Start: 463132

End: 463731

Strand: Direct

Name: 54293369

Synonym: lpl0418

Alternate gene names: NA

Gene position: 463132-463731 (Clockwise)

Preceding gene: 54293367

Following gene: 54293378

Centisome position: 13.84

GC content: 37.33

Gene sequence:

>600_bases
ATGTATTCATCATTATTTCTAAAGAAGGACTTGGGGCATTTGCCTGAAAAAGTTATTTTTCTTGATTTTGACGGCACCGT
TGCTCTTCCTGCAAGGAAGGAAAATGGAGAGTATGATATTCAGTCTGATGGGTCAATTGGAGCTACCCATCTAAATAAAG
AAAAATTTAGACGTTTAGTACAGTTTTCTATTCAGACTGATATTCCTTTGTACTTTTTGAGCGGACGTCCTGATCTTCAG
TCTTGTGTCGATTTAATGACTGATTTTATTGCAAGCGTTGATGGCTTCCATTCTGGTATTGGCGGGTTTAAAAAAGATTC
TCTGTTTTTTATCAGTAAAATGATAGTTGAAGAGGGGAAACTTGTTCGAAAGGAAATAACGACAAAGGCTCAGGTTATTC
AATCCATGCATCATGAAAAATACAGTTATTTACCTAAGGAATCGATTTTACTGGTCGATGACATTCAAGAATACCTCGAC
CCAGTGCGGGAACTGGGTTATAACACTTTGTTGGCAAATCAGGAGAGTTTGGAGCATTTTGATGAAGTAGAGGAATTTAT
GGGGGTAACATTACAAAAAACTATGGCATTCAACACCTAG

Upstream 100 bases:

>100_bases
ACCTTGTTTCGATTGATCTAATCGGATACGCTGACCAGTAGAGATTGAGAATCTCCACAATATTTTGAAGGGATAGAAAC
ATTAAGTGTCAGGAGGAAAA

Downstream 100 bases:

>100_bases
ACAAGGTTATGGTAAATTAAAAGAGTAAATCAAATATTTTTATGCTGATGGCGCTAATTGGTTTAACTCAATTGTTCCAT
TATTTTCAACAGAAGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYSSLFLKKDLGHLPEKVIFLDFDGTVALPARKENGEYDIQSDGSIGATHLNKEKFRRLVQFSIQTDIPLYFLSGRPDLQ
SCVDLMTDFIASVDGFHSGIGGFKKDSLFFISKMIVEEGKLVRKEITTKAQVIQSMHHEKYSYLPKESILLVDDIQEYLD
PVRELGYNTLLANQESLEHFDEVEEFMGVTLQKTMAFNT

Sequences:

>Translated_199_residues
MYSSLFLKKDLGHLPEKVIFLDFDGTVALPARKENGEYDIQSDGSIGATHLNKEKFRRLVQFSIQTDIPLYFLSGRPDLQ
SCVDLMTDFIASVDGFHSGIGGFKKDSLFFISKMIVEEGKLVRKEITTKAQVIQSMHHEKYSYLPKESILLVDDIQEYLD
PVRELGYNTLLANQESLEHFDEVEEFMGVTLQKTMAFNT
>Mature_199_residues
MYSSLFLKKDLGHLPEKVIFLDFDGTVALPARKENGEYDIQSDGSIGATHLNKEKFRRLVQFSIQTDIPLYFLSGRPDLQ
SCVDLMTDFIASVDGFHSGIGGFKKDSLFFISKMIVEEGKLVRKEITTKAQVIQSMHHEKYSYLPKESILLVDDIQEYLD
PVRELGYNTLLANQESLEHFDEVEEFMGVTLQKTMAFNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22712; Mature: 22712

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSSLFLKKDLGHLPEKVIFLDFDGTVALPARKENGEYDIQSDGSIGATHLNKEKFRRLV
CCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH
QFSIQTDIPLYFLSGRPDLQSCVDLMTDFIASVDGFHSGIGGFKKDSLFFISKMIVEEGK
HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVRKEITTKAQVIQSMHHEKYSYLPKESILLVDDIQEYLDPVRELGYNTLLANQESLEHF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHH
DEVEEFMGVTLQKTMAFNT
HHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MYSSLFLKKDLGHLPEKVIFLDFDGTVALPARKENGEYDIQSDGSIGATHLNKEKFRRLV
CCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH
QFSIQTDIPLYFLSGRPDLQSCVDLMTDFIASVDGFHSGIGGFKKDSLFFISKMIVEEGK
HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVRKEITTKAQVIQSMHHEKYSYLPKESILLVDDIQEYLDPVRELGYNTLLANQESLEHF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHH
DEVEEFMGVTLQKTMAFNT
HHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA