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The map label for this gene is adrA [H]

Identifier: 54293367

GI number: 54293367

Start: 461110

End: 462180

Strand: Direct

Name: adrA [H]

Synonym: lpl0416

Alternate gene names: 54293367

Gene position: 461110-462180 (Clockwise)

Preceding gene: 54293366

Following gene: 54293369

Centisome position: 13.78

GC content: 34.08

Gene sequence:

>1071_bases
ATGCATCAAAAGAAGCGGTCTTCATTGGAACTTGAAGCCTTACTGTCGTTATTTGAGGGATCCTTAAGAACTATCCCATT
CAATATCCTTGCGGTGATGGTACTTGCTTTGGGTTTTATCTATACGAACGAGATTCCAATCAAGCTGCTTATTATCTGGT
TTTTTCTCATTTTAATTTTAAGTGTGATTCGTTGGGTAATTAGTCGAATTATAATCAGTAAAGAGTTTTACATCACAAAA
GGAAAGCAGTCTTTAATTGGTTTTTTACTGCTGAATTTTTTTATGGGATTGGCTTGGAGTTTGAGCTACTTTATTTTTTC
CCCTTATTTAAATGACACCAGTGAGTTTATTTTTGTATTCATTCTGGGGGGATTATCGACAGGTGCTATCGCTTCTTTAT
CAATTTATCTTCCCGCCTATTATGCTTACGTATTGCCAATGAATTTTCCAATTATTGCCTACAATTTGTATTTATTTCAG
TTTGATAAAATAATTTTTGGTGTCATGTATTTGCTCTTTTTGATCATAGTATTGTTGACAGCAAGATTAAACTCAAAATT
ACTTTCCAAAGTGAGGGTATTATCTATAACCGATTCATTGACGGGATTATTTAACCGTCGACATTTTGATATGGTGTTCA
GCAATGAACTAAGCAGAGCGAAACGCAATAAATATCCTATCAGCCTGGTTTTCATTGATATAGATAATTTCAAGTATATT
AATGATACTTTTGGTCATTCTGCTGGTGACAGTTTTTTAATTCATGTATCAAATATCCTGAAACAAACGTTACGGCGCTC
AAGCGATAGCATGTTTCGGATTGGTGGCGATGAATATGCTGCCATTCTTATTAATATGCCACCAAATGAAGTGACAACAG
TTTGTGTTTCAATGCAAGAGCAGTTTAATAAAAAAAATCAATATAAAAATGTGTCGTTAAGTATGGGGGTCATAAGCATT
GACTCTATGAGGGTAGTTGATCAACAAAGTGCCATTACTGCAGCGGATAAAACTCTTTATCAAGCAAAAAAAGCAGGGAA
AAATCAAATTAAATCTAAATCGTTAGGCTAG

Upstream 100 bases:

>100_bases
CTAAATGGAATTTTAAATTATTTGCCGTGTGGTAAAGAGCAACTCTGTAAACTAGTCTATACTTGAAATTATAATGAAGG
TGCTTGGGTTTTGAATAATT

Downstream 100 bases:

>100_bases
CAAGAATTGAGAGCCAATTAAAATTGTTGGATTTGATTACGGCAAGTATGAGATAAGAGAGTACAATTTTATTTCTCTTA
TGTCAGAGACGTCCTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLALGFIYTNEIPIKLLIIWFFLILILSVIRWVISRIIISKEFYITK
GKQSLIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKIIFGVMYLLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDMVFSNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSAGDSFLIHVSNILKQTLRRSSDSMFRIGGDEYAAILINMPPNEVTTVCVSMQEQFNKKNQYKNVSLSMGVISI
DSMRVVDQQSAITAADKTLYQAKKAGKNQIKSKSLG

Sequences:

>Translated_356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLALGFIYTNEIPIKLLIIWFFLILILSVIRWVISRIIISKEFYITK
GKQSLIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKIIFGVMYLLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDMVFSNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSAGDSFLIHVSNILKQTLRRSSDSMFRIGGDEYAAILINMPPNEVTTVCVSMQEQFNKKNQYKNVSLSMGVISI
DSMRVVDQQSAITAADKTLYQAKKAGKNQIKSKSLG
>Mature_356_residues
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLALGFIYTNEIPIKLLIIWFFLILILSVIRWVISRIIISKEFYITK
GKQSLIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVFILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQ
FDKIIFGVMYLLFLIIVLLTARLNSKLLSKVRVLSITDSLTGLFNRRHFDMVFSNELSRAKRNKYPISLVFIDIDNFKYI
NDTFGHSAGDSFLIHVSNILKQTLRRSSDSMFRIGGDEYAAILINMPPNEVTTVCVSMQEQFNKKNQYKNVSLSMGVISI
DSMRVVDQQSAITAADKTLYQAKKAGKNQIKSKSLG

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=185, Percent_Identity=33.5135135135135, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87081977, Length=155, Percent_Identity=38.0645161290323, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=36.875, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI87082007, Length=203, Percent_Identity=30.0492610837438, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787262, Length=168, Percent_Identity=30.952380952381, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081974, Length=183, Percent_Identity=28.9617486338798, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788956, Length=168, Percent_Identity=33.9285714285714, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788381, Length=183, Percent_Identity=27.8688524590164, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787056, Length=153, Percent_Identity=32.6797385620915, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081881, Length=182, Percent_Identity=27.4725274725275, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787541, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788085, Length=165, Percent_Identity=27.8787878787879, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787816, Length=178, Percent_Identity=28.6516853932584, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 40574; Mature: 40574

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLALGFIYTNEIPIKLLIIWFFLILIL
CCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVIRWVISRIIISKEFYITKGKQSLIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVF
HHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQFDKIIFGVMYLLFLIIVLLT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNSKLLSKVRVLSITDSLTGLFNRRHFDMVFSNELSRAKRNKYPISLVFIDIDNFKYI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
NDTFGHSAGDSFLIHVSNILKQTLRRSSDSMFRIGGDEYAAILINMPPNEVTTVCVSMQE
CHHCCCCCCCHHEEHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHH
QFNKKNQYKNVSLSMGVISIDSMRVVDQQSAITAADKTLYQAKKAGKNQIKSKSLG
HHCHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHQKKRSSLELEALLSLFEGSLRTIPFNILAVMVLALGFIYTNEIPIKLLIIWFFLILIL
CCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVIRWVISRIIISKEFYITKGKQSLIGFLLLNFFMGLAWSLSYFIFSPYLNDTSEFIFVF
HHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ILGGLSTGAIASLSIYLPAYYAYVLPMNFPIIAYNLYLFQFDKIIFGVMYLLFLIIVLLT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNSKLLSKVRVLSITDSLTGLFNRRHFDMVFSNELSRAKRNKYPISLVFIDIDNFKYI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
NDTFGHSAGDSFLIHVSNILKQTLRRSSDSMFRIGGDEYAAILINMPPNEVTTVCVSMQE
CHHCCCCCCCHHEEHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHH
QFNKKNQYKNVSLSMGVISIDSMRVVDQQSAITAADKTLYQAKKAGKNQIKSKSLG
HHCHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]