| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
Click here to switch to the map view.
The map label for this gene is 54020411
Identifier: 54020411
GI number: 54020411
Start: 268594
End: 271545
Strand: Reverse
Name: 54020411
Synonym: mhp244
Alternate gene names: NA
Gene position: 271545-268594 (Counterclockwise)
Preceding gene: 54020412
Following gene: 54020410
Centisome position: 30.42
GC content: 30.45
Gene sequence:
>2952_bases TTGCTGCAGCAGGTTTTGAGTCTGCCGTGTCTACCATTCCACCAATGAGCCTTTGTGAAAATCAAAAAAAATATCAAATT TAACTTAAATTATATTATAATTATACCAATGATGGCTAAAAAAGAAAAGAAAACTTGAAAAAAATTTTTATTTAGAATTA TGCCGCTACTAACAGCGCCATTTTTTTTGACTGCTATAGGTTGCACGCCTTTTGGAGCGGTCAAAAAAATAGGTGGATTA GTTGCCGAGATTGGCGAAAATAATCCTTGAGATCAAGAACTAAATCCTAAAAAACCACTAGATTCAATTATTAGTGGGCG AATTAGGTCAAGATTTGAAAAAATTAAGGCATCTGAATTTTTAAAACAAATAACTTTCTTAAATAATGAAAATAGTCTAA ATGAAATTAATTCACAAATTGCTAAGGAAAAAGGTAAGCTTTTAAATTCAGCAATTCTTTGAAGTTTTATTCCGGGAGTC GATAATTATGACCTTAATAAAAAATTTGATATCCAAATTAAGGCTGATCCTAATTCGGTAAATGATGATTATGGGGCCAT TAAAATTAAGGTTGATGCTTTCGAAAAAGGTTCAGACCGGTTAGTTCAAAGCAAAAATTTTCTCATTTCGGGATTTAAGA CAGAAATAACCGGAATTTTTGCATATAAACAGCGAATTGCAACAGCTTTTCAGAATATTAATACCCTAACTTTAAAAGAT GAAAAAAATTTTAATGTTAATAAACTTGATTCTAATGCAGATATTTGGGATTTTTTAAATCTCCCATCCAATTTTGAAAA ATTGGATATTAACAAGTTGCGAAATTCTGATCAATTTGATGTACCTGAATCTGATGTCTCAGCGCCTAATATTGCCAAAA TTGCCAAAAATCCTTACCGTTTAAGGGTAAAAAATTTCTATTATCTAAAAGCTACCATTCTAAAAAATTCCTATGATAAA AACACTGGTGAAATCGATGTAATTTTATCAATTTATCATGATTCTTTTAATAATTATGTCTCAAAAATTGTAAAATTAAA GACCAAAGCAAACCCTGGATTTAATAAATTAACCGAAAATAAAAGCTTTAAATTAAAAGAAAAATATGCGAATTTTTTAC CTTCTTTTCTTATAAATTCTCACATAAATCAGAGTCAATCACTAGCTGAATTTATTAATTTTGGTGATTTTAACTATCAA AATTATGATATTAAAATTGTTCCTTCGCTTGCAAATGACCAAAATGGTGATTTTTATATTATTTTAAATAAAAAAGAAAC TAGTCTAACTTCTGGATCAATCAGTCCGGGTCAGGTAATTAAAGTTGAAGGTTTTAATTCCTATGATAAAATTTTTTCAA GTGAGGAATTTACTAGGGAAATTGACTTTGACTATCTTGATTCTTGATATAAATTACCAAAAACAGCCGATCTTGCTGAA AAACTACAGAGTATTTCCGAAAGTTTAAATTCTTCAAGTGATTCACTTTTATGACCGCTTTTTGGCAAAGCAGTAGAAAA AGCGCTTTCATCAGAGGAATTATTTAAAAACACTAATAATTTGAAAAGTTTTGAAAAATTTAACTATAAATTTGCCTCAT TAGTTGATTTTAAAATTGATGAGACTGGTATTAGTTTCTATTTTGGAAATTCACTTCAGGATTATTATCAAGTAAAAATT AAATTTAGCCAAAAAACTGAAAGTAAAAATATTATCGCTGATTTTGGGGCAAAAGTTCTTGAAAAAGATTCAATAAATAG CTCGCTTCGTGCAAGATCGCTTGTAATTCAACTCCGTTCGAATGAATATGATCGCCAAACAAAAACAAATACAAGCAAAA TTACATCAGGAACCGCTTGAGTTTTTGATCGAAAATTAAAAAAAGACCCAAAGAATCCAGGAAAATTTCTACCAACAAAT ACTTATTATTTAGCGACAAATTTACACGTTATTGCTGATTTACTCAATAAACCTGACCAAGTTTATTCATTTTCATACCT CCTTGATGGCAGCCTTAAAAATCTTGATACAATCAGTTTTGATGATACAAATTTATTCCGTCGTTTTGATCGTGTTGCAA AAACTGCAAATAAAAAAGATTATCTAGGACCTGAAGGTTTTCAGTATATCACTAGTGAATCAAAGAAATTTTGGGAAAAT TTAAAAATTAATCCAATCGGGCTTAATATGCCTGACAAGGATAAATTCCGTGATTTTGCAATCATCGAAATTACTTTTCC AGAAGATAAAGTCAAAAAAAATTCTTTTAATTTCGGCATCCCTTTTCTTGATCTTGATTTTTTTGGTCAACCTTCATATA TAAAAAATATTCCTGATGCAGTTAAAAATTATCAAAAATCGCCGCTTGATTTTTTAGTTACTGATAAATTAGTGCCTAAT TTTACAAAGGCAACCCAAGAAAAAATTACAGACAAAATCAAAAAAGCACTACCCTTACATGCTTATTTAGGTGGATTTTT AGGTGGATTTACTTGAATTACCGACAACAAAAATGCATTTATTACAACTAATGGAATTCTTAAAGAAACTGATTTTCGCC AGGAAGATTCAATAAAAAAATTTCAAGGGGCCAACTCAATTTCGCTCCCTGGTCTTCGTGGTGGTCATGGAATGTCGGGT TCGCTTGTAGTTAATGAATATAATCAAGTTCTTGGAATTTTTTGGGGCGGATATTTCCCGCCAACCTTACCTGGTCAAAA CCAGCTTGTAAAAGGAATTGGCCAATTTGATCCAATTGGTCTAAAAACTGACTCAAATCCGACAATTTTAGCAAAATGAC TCGCACAGACTCAGGATATCCAAACCGATCTTGATGCAAGACAGGAAAAAGTTTTTAGCCTTGAGGATCCAAAAGAACTC GAAAAACTCGCACATTCAGCAAGGTGAATCAAATTTGATAATTTCATAGAAAAAGAAAATTCAAACATTTAG
Upstream 100 bases:
>100_bases ATTAACCCTTTTTTAATTTTTCTTATATAATTTAAAAAAAATTAAAAAAAGGTTATAAAAATTATTTTGGTGGCTCATAT CGGACTCGAACCGATACGCA
Downstream 100 bases:
>100_bases TTTTGGCTTTTAAAAAAACAAAACTAAATGTTTTTTAACTAATTATGGAAAAAAAAATGTTTAATTCTCTGATGAAAATT CATCAGAAGTATCAGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 983; Mature: 983
Protein sequence:
>983_residues MLQQVLSLPCLPFHQWAFVKIKKNIKFNLNYIIIIPMMAKKEKKTWKKFLFRIMPLLTAPFFLTAIGCTPFGAVKKIGGL VAEIGENNPWDQELNPKKPLDSIISGRIRSRFEKIKASEFLKQITFLNNENSLNEINSQIAKEKGKLLNSAILWSFIPGV DNYDLNKKFDIQIKADPNSVNDDYGAIKIKVDAFEKGSDRLVQSKNFLISGFKTEITGIFAYKQRIATAFQNINTLTLKD EKNFNVNKLDSNADIWDFLNLPSNFEKLDINKLRNSDQFDVPESDVSAPNIAKIAKNPYRLRVKNFYYLKATILKNSYDK NTGEIDVILSIYHDSFNNYVSKIVKLKTKANPGFNKLTENKSFKLKEKYANFLPSFLINSHINQSQSLAEFINFGDFNYQ NYDIKIVPSLANDQNGDFYIILNKKETSLTSGSISPGQVIKVEGFNSYDKIFSSEEFTREIDFDYLDSWYKLPKTADLAE KLQSISESLNSSSDSLLWPLFGKAVEKALSSEELFKNTNNLKSFEKFNYKFASLVDFKIDETGISFYFGNSLQDYYQVKI KFSQKTESKNIIADFGAKVLEKDSINSSLRARSLVIQLRSNEYDRQTKTNTSKITSGTAWVFDRKLKKDPKNPGKFLPTN TYYLATNLHVIADLLNKPDQVYSFSYLLDGSLKNLDTISFDDTNLFRRFDRVAKTANKKDYLGPEGFQYITSESKKFWEN LKINPIGLNMPDKDKFRDFAIIEITFPEDKVKKNSFNFGIPFLDLDFFGQPSYIKNIPDAVKNYQKSPLDFLVTDKLVPN FTKATQEKITDKIKKALPLHAYLGGFLGGFTWITDNKNAFITTNGILKETDFRQEDSIKKFQGANSISLPGLRGGHGMSG SLVVNEYNQVLGIFWGGYFPPTLPGQNQLVKGIGQFDPIGLKTDSNPTILAKWLAQTQDIQTDLDARQEKVFSLEDPKEL EKLAHSARWIKFDNFIEKENSNI
Sequences:
>Translated_983_residues MLQQVLSLPCLPFHQ*AFVKIKKNIKFNLNYIIIIPMMAKKEKKT*KKFLFRIMPLLTAPFFLTAIGCTPFGAVKKIGGL VAEIGENNP*DQELNPKKPLDSIISGRIRSRFEKIKASEFLKQITFLNNENSLNEINSQIAKEKGKLLNSAIL*SFIPGV DNYDLNKKFDIQIKADPNSVNDDYGAIKIKVDAFEKGSDRLVQSKNFLISGFKTEITGIFAYKQRIATAFQNINTLTLKD EKNFNVNKLDSNADIWDFLNLPSNFEKLDINKLRNSDQFDVPESDVSAPNIAKIAKNPYRLRVKNFYYLKATILKNSYDK NTGEIDVILSIYHDSFNNYVSKIVKLKTKANPGFNKLTENKSFKLKEKYANFLPSFLINSHINQSQSLAEFINFGDFNYQ NYDIKIVPSLANDQNGDFYIILNKKETSLTSGSISPGQVIKVEGFNSYDKIFSSEEFTREIDFDYLDS*YKLPKTADLAE KLQSISESLNSSSDSLL*PLFGKAVEKALSSEELFKNTNNLKSFEKFNYKFASLVDFKIDETGISFYFGNSLQDYYQVKI KFSQKTESKNIIADFGAKVLEKDSINSSLRARSLVIQLRSNEYDRQTKTNTSKITSGTA*VFDRKLKKDPKNPGKFLPTN TYYLATNLHVIADLLNKPDQVYSFSYLLDGSLKNLDTISFDDTNLFRRFDRVAKTANKKDYLGPEGFQYITSESKKFWEN LKINPIGLNMPDKDKFRDFAIIEITFPEDKVKKNSFNFGIPFLDLDFFGQPSYIKNIPDAVKNYQKSPLDFLVTDKLVPN FTKATQEKITDKIKKALPLHAYLGGFLGGFT*ITDNKNAFITTNGILKETDFRQEDSIKKFQGANSISLPGLRGGHGMSG SLVVNEYNQVLGIFWGGYFPPTLPGQNQLVKGIGQFDPIGLKTDSNPTILAK*LAQTQDIQTDLDARQEKVFSLEDPKEL EKLAHSAR*IKFDNFIEKENSNI >Mature_983_residues MLQQVLSLPCLPFHQ*AFVKIKKNIKFNLNYIIIIPMMAKKEKKT*KKFLFRIMPLLTAPFFLTAIGCTPFGAVKKIGGL VAEIGENNP*DQELNPKKPLDSIISGRIRSRFEKIKASEFLKQITFLNNENSLNEINSQIAKEKGKLLNSAIL*SFIPGV DNYDLNKKFDIQIKADPNSVNDDYGAIKIKVDAFEKGSDRLVQSKNFLISGFKTEITGIFAYKQRIATAFQNINTLTLKD EKNFNVNKLDSNADIWDFLNLPSNFEKLDINKLRNSDQFDVPESDVSAPNIAKIAKNPYRLRVKNFYYLKATILKNSYDK NTGEIDVILSIYHDSFNNYVSKIVKLKTKANPGFNKLTENKSFKLKEKYANFLPSFLINSHINQSQSLAEFINFGDFNYQ NYDIKIVPSLANDQNGDFYIILNKKETSLTSGSISPGQVIKVEGFNSYDKIFSSEEFTREIDFDYLDS*YKLPKTADLAE KLQSISESLNSSSDSLL*PLFGKAVEKALSSEELFKNTNNLKSFEKFNYKFASLVDFKIDETGISFYFGNSLQDYYQVKI KFSQKTESKNIIADFGAKVLEKDSINSSLRARSLVIQLRSNEYDRQTKTNTSKITSGTA*VFDRKLKKDPKNPGKFLPTN TYYLATNLHVIADLLNKPDQVYSFSYLLDGSLKNLDTISFDDTNLFRRFDRVAKTANKKDYLGPEGFQYITSESKKFWEN LKINPIGLNMPDKDKFRDFAIIEITFPEDKVKKNSFNFGIPFLDLDFFGQPSYIKNIPDAVKNYQKSPLDFLVTDKLVPN FTKATQEKITDKIKKALPLHAYLGGFLGGFT*ITDNKNAFITTNGILKETDFRQEDSIKKFQGANSISLPGLRGGHGMSG SLVVNEYNQVLGIFWGGYFPPTLPGQNQLVKGIGQFDPIGLKTDSNPTILAK*LAQTQDIQTDLDARQEKVFSLEDPKEL EKLAHSAR*IKFDNFIEKENSNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110253; Mature: 110253
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQVLSLPCLPFHQAFVKIKKNIKFNLNYIIIIPMMAKKEKKTKKFLFRIMPLLTAPFF CCHHHHCCCCCHHHHHHHHHHHCCEEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH LTAIGCTPFGAVKKIGGLVAEIGENNPDQELNPKKPLDSIISGRIRSRFEKIKASEFLKQ HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ITFLNNENSLNEINSQIAKEKGKLLNSAILSFIPGVDNYDLNKKFDIQIKADPNSVNDDY HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC GAIKIKVDAFEKGSDRLVQSKNFLISGFKTEITGIFAYKQRIATAFQNINTLTLKDEKNF CEEEEEEECCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC NVNKLDSNADIWDFLNLPSNFEKLDINKLRNSDQFDVPESDVSAPNIAKIAKNPYRLRVK CCEEECCCCCHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEE NFYYLKATILKNSYDKNTGEIDVILSIYHDSFNNYVSKIVKLKTKANPGFNKLTENKSFK EEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC LKEKYANFLPSFLINSHINQSQSLAEFINFGDFNYQNYDIKIVPSLANDQNGDFYIILNK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEC KETSLTSGSISPGQVIKVEGFNSYDKIFSSEEFTREIDFDYLDSYKLPKTADLAEKLQSI CCCCCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH SESLNSSSDSLLPLFGKAVEKALSSEELFKNTNNLKSFEKFNYKFASLVDFKIDETGISF HHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCCEEEEEEEEEECCCCEEE YFGNSLQDYYQVKIKFSQKTESKNIIADFGAKVLEKDSINSSLRARSLVIQLRSNEYDRQ EECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCH TKTNTSKITSGTAVFDRKLKKDPKNPGKFLPTNTYYLATNLHVIADLLNKPDQVYSFSYL HCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHEEEEEE LDGSLKNLDTISFDDTNLFRRFDRVAKTANKKDYLGPEGFQYITSESKKFWENLKINPIG ECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE LNMPDKDKFRDFAIIEITFPEDKVKKNSFNFGIPFLDLDFFGQPSYIKNIPDAVKNYQKS CCCCCHHHCCCEEEEEEECCHHHHCCCCCCCCCCEEEEECCCCCHHHHHCHHHHHHHCCC PLDFLVTDKLVPNFTKATQEKITDKIKKALPLHAYLGGFLGGFTITDNKNAFITTNGILK CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEEECCCEE ETDFRQEDSIKKFQGANSISLPGLRGGHGMSGSLVVNEYNQVLGIFWGGYFPPTLPGQNQ CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHH LVKGIGQFDPIGLKTDSNPTILAKLAQTQDIQTDLDARQEKVFSLEDPKELEKLAHSARI HHHHCCCCCCCCEECCCCCCEEEEHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC KFDNFIEKENSNI CHHHHHHHCCCCC >Mature Secondary Structure MLQQVLSLPCLPFHQAFVKIKKNIKFNLNYIIIIPMMAKKEKKTKKFLFRIMPLLTAPFF CCHHHHCCCCCHHHHHHHHHHHCCEEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH LTAIGCTPFGAVKKIGGLVAEIGENNPDQELNPKKPLDSIISGRIRSRFEKIKASEFLKQ HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ITFLNNENSLNEINSQIAKEKGKLLNSAILSFIPGVDNYDLNKKFDIQIKADPNSVNDDY HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC GAIKIKVDAFEKGSDRLVQSKNFLISGFKTEITGIFAYKQRIATAFQNINTLTLKDEKNF CEEEEEEECCCCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC NVNKLDSNADIWDFLNLPSNFEKLDINKLRNSDQFDVPESDVSAPNIAKIAKNPYRLRVK CCEEECCCCCHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEE NFYYLKATILKNSYDKNTGEIDVILSIYHDSFNNYVSKIVKLKTKANPGFNKLTENKSFK EEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC LKEKYANFLPSFLINSHINQSQSLAEFINFGDFNYQNYDIKIVPSLANDQNGDFYIILNK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEC KETSLTSGSISPGQVIKVEGFNSYDKIFSSEEFTREIDFDYLDSYKLPKTADLAEKLQSI CCCCCCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH SESLNSSSDSLLPLFGKAVEKALSSEELFKNTNNLKSFEKFNYKFASLVDFKIDETGISF HHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCCEEEEEEEEEECCCCEEE YFGNSLQDYYQVKIKFSQKTESKNIIADFGAKVLEKDSINSSLRARSLVIQLRSNEYDRQ EECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCH TKTNTSKITSGTAVFDRKLKKDPKNPGKFLPTNTYYLATNLHVIADLLNKPDQVYSFSYL HCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHEEEEEE LDGSLKNLDTISFDDTNLFRRFDRVAKTANKKDYLGPEGFQYITSESKKFWENLKINPIG ECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE LNMPDKDKFRDFAIIEITFPEDKVKKNSFNFGIPFLDLDFFGQPSYIKNIPDAVKNYQKS CCCCCHHHCCCEEEEEEECCHHHHCCCCCCCCCCEEEEECCCCCHHHHHCHHHHHHHCCC PLDFLVTDKLVPNFTKATQEKITDKIKKALPLHAYLGGFLGGFTITDNKNAFITTNGILK CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEEECCCEE ETDFRQEDSIKKFQGANSISLPGLRGGHGMSGSLVVNEYNQVLGIFWGGYFPPTLPGQNQ CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCHH LVKGIGQFDPIGLKTDSNPTILAKLAQTQDIQTDLDARQEKVFSLEDPKELEKLAHSARI HHHHCCCCCCCCEECCCCCCEEEEHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC KFDNFIEKENSNI CHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA