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The map label for this gene is 54020340

Identifier: 54020340

GI number: 54020340

Start: 129959

End: 130297

Strand: Reverse

Name: 54020340

Synonym: mhp109

Alternate gene names: NA

Gene position: 130297-129959 (Counterclockwise)

Preceding gene: 54020341

Following gene: 54020339

Centisome position: 14.59

GC content: 31.86

Gene sequence:

>339_bases
ATGAAATTTCACGGTCTACGGGCAAAAAAAATACTTCAGGATTTAATTCTTGACCGTTGAATTTCCTTTGAGATCGTAAA
TACCGATCCATATCATCGACTTGTAGCAATCATCAGCAATGAAAATGGTGAAAATATTAATCTGAAAATGGTAGAAGGTG
GTTTTGCAATTAATCGTTATAGTCAATATGAAAATCCAAAAAAAAATTATTATTACCCGGAATACCGTGATTTAATTAAT
GCATTGCGAAATGCCCAGGAAAAGGCAAAAAACGAAAATTTATTACTTTGAAGGGATGGAATTCTTCCAGTTTATGGAAT
AAATCCAGTGCTAAAATAA

Upstream 100 bases:

>100_bases
TACTTTTACTGATAAAAACAACCGTCATTTTCGACTTTTTGGGATAGATACTCCTGAACTTCAACTTCAAAGACCCAATC
CAAGAATAAATAAAAAATTA

Downstream 100 bases:

>100_bases
ATTTCTAATTCATTTCTAATTTAAAAAACACTATAAAAACAAGTGTTTTTTAAATTAGAATTATAAAAATAGAACTAATA
ATTTTGTCTAACAAAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKFHGLRAKKILQDLILDRWISFEIVNTDPYHRLVAIISNENGENINLKMVEGGFAINRYSQYENPKKNYYYPEYRDLIN
ALRNAQEKAKNENLLLWRDGILPVYGINPVLK

Sequences:

>Translated_112_residues
MKFHGLRAKKILQDLILDR*ISFEIVNTDPYHRLVAIISNENGENINLKMVEGGFAINRYSQYENPKKNYYYPEYRDLIN
ALRNAQEKAKNENLLL*RDGILPVYGINPVLK
>Mature_112_residues
MKFHGLRAKKILQDLILDR*ISFEIVNTDPYHRLVAIISNENGENINLKMVEGGFAINRYSQYENPKKNYYYPEYRDLIN
ALRNAQEKAKNENLLL*RDGILPVYGINPVLK

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12817; Mature: 12817

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFHGLRAKKILQDLILDRISFEIVNTDPYHRLVAIISNENGENINLKMVEGGFAINRYS
CCCCCHHHHHHHHHHHHHHHCEEEECCCCHHEEEEEEECCCCCEEEEEEEECCEEECCCH
QYENPKKNYYYPEYRDLINALRNAQEKAKNENLLLRDGILPVYGINPVLK
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MKFHGLRAKKILQDLILDRISFEIVNTDPYHRLVAIISNENGENINLKMVEGGFAINRYS
CCCCCHHHHHHHHHHHHHHHCEEEECCCCHHEEEEEEECCCCCEEEEEEEECCEEECCCH
QYENPKKNYYYPEYRDLINALRNAQEKAKNENLLLRDGILPVYGINPVLK
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA