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The map label for this gene is 54020289

Identifier: 54020289

GI number: 54020289

Start: 845051

End: 845914

Strand: Direct

Name: 54020289

Synonym: mhp670

Alternate gene names: NA

Gene position: 845051-845914 (Clockwise)

Preceding gene: 54020288

Following gene: 54020290

Centisome position: 94.66

GC content: 23.96

Gene sequence:

>864_bases
ATGAATACAAAAATTCAGATAATTTTTGGGCAAAAAGGTGCTAATTTGACCTTTTTAGATTCACAAAGTCAAAAAAAAAT
AAAAGTAAAAATCCCAATTTTTACAATATGTTTTCAAAAAAATATACCAAAATACCTTAATTTTAATCTAAAATTTATTT
TAAAATTAAGGTATTTTGAAAATTTTATCTATTGACTTATTGAGCAAAATTTACTTTTAGAAAAACAAATTTTTCAGCAA
AAAATGCTGAAAAATAAAGTATTTTGTTTAAAAATGGTAAATAATCTCCACTTGTTATTCTGAAAATATAGTTTTAATGA
TATTATAATTTTTATTGAAAATGATGAAAATTTTGCTTCTTGATTTAAACAAAATTTTCATCTTTTCAAATTAGAAATAA
AGAAATACCAAAAACTTTTTCTGACAACAACAGATACGGTTCCGGGAATTGCTAGTTTTTACAAAAATTGCGATTTAGAT
GCAATTTTTGTAATCAAAAAACGCGATTTTTCAAAAAAAATCGTTACTTTAGTAGCTAATTTAGAACAAATAAAACCATT
AATAAAACAAGAAAATTATAAAAAATTAAGGAAAATTACAAAAAAAATCTGGCCTGGAGCTACCACTTTAATAATAGAAA
ATCAATCTTTTCGCATCCCAAACCAGGTCAAACTTCTTAAACTTCTTAAAAAAAACGGGCCAGCATTTGTCACAAGTGCA
AATATTTCCAATGAAAAACCTCTGGATATTGTTAGTGCAAAAAGAAAATTTTGGCAAATAACCAAAATTTTTAATTTCGG
ACCTGGAACAGGAAAAGTTTCTAGAATTTTCGACCTTGATAATAAAAAATGAATTAGAAAATAA

Upstream 100 bases:

>100_bases
AATAGCCGCAGATGCAAATCGTTTTGAGGAAGCAATTCAAATTCGTGATTTGATTGCCGAAATTAAATTAAAAATTTAAT
AAATTATAAAAAATTCAGCT

Downstream 100 bases:

>100_bases
AAAAAATCCCTAAAAAAGGGATTTTCCAAAATAATTTGATATGGTGGGAACGAATGGGATCGAACCATCGACCTCACGAT
TATCAGTCGTGTGCTCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNTKIQIIFGQKGANLTFLDSQSQKKIKVKIPIFTICFQKNIPKYLNFNLKFILKLRYFENFIYWLIEQNLLLEKQIFQQ
KMLKNKVFCLKMVNNLHLLFWKYSFNDIIIFIENDENFASWFKQNFHLFKLEIKKYQKLFLTTTDTVPGIASFYKNCDLD
AIFVIKKRDFSKKIVTLVANLEQIKPLIKQENYKKLRKITKKIWPGATTLIIENQSFRIPNQVKLLKLLKKNGPAFVTSA
NISNEKPLDIVSAKRKFWQITKIFNFGPGTGKVSRIFDLDNKKWIRK

Sequences:

>Translated_287_residues
MNTKIQIIFGQKGANLTFLDSQSQKKIKVKIPIFTICFQKNIPKYLNFNLKFILKLRYFENFIY*LIEQNLLLEKQIFQQ
KMLKNKVFCLKMVNNLHLLF*KYSFNDIIIFIENDENFAS*FKQNFHLFKLEIKKYQKLFLTTTDTVPGIASFYKNCDLD
AIFVIKKRDFSKKIVTLVANLEQIKPLIKQENYKKLRKITKKIWPGATTLIIENQSFRIPNQVKLLKLLKKNGPAFVTSA
NISNEKPLDIVSAKRKFWQITKIFNFGPGTGKVSRIFDLDNKK*IRK
>Mature_287_residues
MNTKIQIIFGQKGANLTFLDSQSQKKIKVKIPIFTICFQKNIPKYLNFNLKFILKLRYFENFIY*LIEQNLLLEKQIFQQ
KMLKNKVFCLKMVNNLHLLF*KYSFNDIIIFIENDENFAS*FKQNFHLFKLEIKKYQKLFLTTTDTVPGIASFYKNCDLD
AIFVIKKRDFSKKIVTLVANLEQIKPLIKQENYKKLRKITKKIWPGATTLIIENQSFRIPNQVKLLKLLKKNGPAFVTSA
NISNEKPLDIVSAKRKFWQITKIFNFGPGTGKVSRIFDLDNKK*IRK

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR007848
- InterPro:   IPR006070 [H]

Pfam domain/function: PF05175 MTS; PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 33293; Mature: 33293

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKIQIIFGQKGANLTFLDSQSQKKIKVKIPIFTICFQKNIPKYLNFNLKFILKLRYFE
CCCEEEEEECCCCCEEEEEECCCCCEEEEEECEEEEEECCCCHHHHCCCEEEEEEEHHHH
NFIYLIEQNLLLEKQIFQQKMLKNKVFCLKMVNNLHLLFKYSFNDIIIFIENDENFASFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCEEEEEEEECCEEEEEEECCCCHHHHH
QNFHLFKLEIKKYQKLFLTTTDTVPGIASFYKNCDLDAIFVIKKRDFSKKIVTLVANLEQ
HCCEEEEEEEHHCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH
IKPLIKQENYKKLRKITKKIWPGATTLIIENQSFRIPNQVKLLKLLKKNGPAFVTSANIS
HHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCC
NEKPLDIVSAKRKFWQITKIFNFGPGTGKVSRIFDLDNKKIRK
CCCCCHHHHHHHHHHEEEHEEECCCCCCCEEEEEECCCHHCCC
>Mature Secondary Structure
MNTKIQIIFGQKGANLTFLDSQSQKKIKVKIPIFTICFQKNIPKYLNFNLKFILKLRYFE
CCCEEEEEECCCCCEEEEEECCCCCEEEEEECEEEEEECCCCHHHHCCCEEEEEEEHHHH
NFIYLIEQNLLLEKQIFQQKMLKNKVFCLKMVNNLHLLFKYSFNDIIIFIENDENFASFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCEEEEEEEECCEEEEEEECCCCHHHHH
QNFHLFKLEIKKYQKLFLTTTDTVPGIASFYKNCDLDAIFVIKKRDFSKKIVTLVANLEQ
HCCEEEEEEEHHCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH
IKPLIKQENYKKLRKITKKIWPGATTLIIENQSFRIPNQVKLLKLLKKNGPAFVTSANIS
HHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCC
NEKPLDIVSAKRKFWQITKIFNFGPGTGKVSRIFDLDNKKIRK
CCCCCHHHHHHHHHHEEEHEEECCCCCCCEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]