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The map label for this gene is degS [C]

Identifier: 54020251

GI number: 54020251

Start: 736276

End: 736938

Strand: Direct

Name: degS [C]

Synonym: mhp586

Alternate gene names: 54020251

Gene position: 736276-736938 (Clockwise)

Preceding gene: 54020250

Following gene: 54020252

Centisome position: 82.47

GC content: 26.4

Gene sequence:

>663_bases
ATGAAAAAATTTACTAAAAAATACGGTTTTATTGGTTTATTTTTGGCTCTAAATCTTGGAATTTTGTTGGCAAACGTTGC
TTTGCTAACAAATAATTGAATAAAACTGAATCCAAAAGTTAATCTTGAAAGTCTTTTAAAGTCAATTGTTGAAATTAAGA
TTCAAAAAAATGAGGAAATTTCTTTTGCTACCGGTTTTGTTATAGATAATAAAATTATTACTAATAAACACATTCTTGAA
AATAGCGATGAAATTGATATTTTTTATCGGCTTGCAAATGAAAAAGACTATAAAAAAACCAGAATTATAAAAATTTCACA
AAACTATGACATATTAAGTTTGCAATTAAACACACAAGTTAAAAATCTTGAAATAGAAGAAAATTTTAATTATGCCGATG
AAATTTTTACAATTGGAAACCCACATAATCTTGGCTTGACAATCAGCAAAGGCATTATTTCAGGAACTAATAAATTAGCA
AATCAAAGTTTTGTTCGAACTAGTATCACAATTGAGCCAGGAAATAGTGGCGGACCTGTTTTAAATACTAAAAACAAAGT
AATTGGGATAATGACTTTTCGCCTTATAAATGAAAAACCAGTTCAAGGTATTTCTTTTTTTCTCCCTTCAAGTCAAATAA
AAGAGTTTTTAAATTCAAATTAA

Upstream 100 bases:

>100_bases
TAATAGTTTTAATATTCTGTGACATAATCAGAGCTTTTTAAATACTTTTAGGTTATACTATACCTTAAATTTGTTATTTA
TAAGACACCTTTAAATAAAA

Downstream 100 bases:

>100_bases
ATTTTTAATATTCTAAATTATTTACTATCAAAAACCATTAAATTAATATACTCCAAATTATTAAAATTTGTGATTAAGTT
TTACTCTAGTAAGAAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKFTKKYGFIGLFLALNLGILLANVALLTNNWIKLNPKVNLESLLKSIVEIKIQKNEEISFATGFVIDNKIITNKHILE
NSDEIDIFYRLANEKDYKKTRIIKISQNYDILSLQLNTQVKNLEIEENFNYADEIFTIGNPHNLGLTISKGIISGTNKLA
NQSFVRTSITIEPGNSGGPVLNTKNKVIGIMTFRLINEKPVQGISFFLPSSQIKEFLNSN

Sequences:

>Translated_220_residues
MKKFTKKYGFIGLFLALNLGILLANVALLTNN*IKLNPKVNLESLLKSIVEIKIQKNEEISFATGFVIDNKIITNKHILE
NSDEIDIFYRLANEKDYKKTRIIKISQNYDILSLQLNTQVKNLEIEENFNYADEIFTIGNPHNLGLTISKGIISGTNKLA
NQSFVRTSITIEPGNSGGPVLNTKNKVIGIMTFRLINEKPVQGISFFLPSSQIKEFLNSN
>Mature_220_residues
MKKFTKKYGFIGLFLALNLGILLANVALLTNN*IKLNPKVNLESLLKSIVEIKIQKNEEISFATGFVIDNKIITNKHILE
NSDEIDIFYRLANEKDYKKTRIIKISQNYDILSLQLNTQVKNLEIEENFNYADEIFTIGNPHNLGLTISKGIISGTNKLA
NQSFVRTSITIEPGNSGGPVLNTKNKVIGIMTFRLINEKPVQGISFFLPSSQIKEFLNSN

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=200, Percent_Identity=26.5, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI24308541, Length=168, Percent_Identity=27.9761904761905, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI1789630, Length=168, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786356, Length=168, Percent_Identity=27.9761904761905, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789629, Length=152, Percent_Identity=30.9210526315789, Blast_Score=61, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24646839, Length=195, Percent_Identity=25.6410256410256, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 24631; Mature: 24631

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTKKYGFIGLFLALNLGILLANVALLTNNIKLNPKVNLESLLKSIVEIKIQKNEEIS
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHEEEECCCCCEE
FATGFVIDNKIITNKHILENSDEIDIFYRLANEKDYKKTRIIKISQNYDILSLQLNTQVK
EEEEEEEECEEECCCEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCEEE
NLEIEENFNYADEIFTIGNPHNLGLTISKGIISGTNKLANQSFVRTSITIEPGNSGGPVL
EEEEECCCCCCHHEEECCCCCCCCEEEECCEECCCHHHCCCCEEEEEEEEECCCCCCCEE
NTKNKVIGIMTFRLINEKPVQGISFFLPSSQIKEFLNSN
ECCCCEEEEEEEEEECCCCCCCEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MKKFTKKYGFIGLFLALNLGILLANVALLTNNIKLNPKVNLESLLKSIVEIKIQKNEEIS
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHEEEECCCCCEE
FATGFVIDNKIITNKHILENSDEIDIFYRLANEKDYKKTRIIKISQNYDILSLQLNTQVK
EEEEEEEECEEECCCEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCEEE
NLEIEENFNYADEIFTIGNPHNLGLTISKGIISGTNKLANQSFVRTSITIEPGNSGGPVL
EEEEECCCCCCHHEEECCCCCCCCEEEECCEECCCHHHCCCCEEEEEEEEECCCCCCCEE
NTKNKVIGIMTFRLINEKPVQGISFFLPSSQIKEFLNSN
ECCCCEEEEEEEEEECCCCCCCEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA