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The map label for this gene is yfhH [C]

Identifier: 54020250

GI number: 54020250

Start: 720537

End: 721316

Strand: Direct

Name: yfhH [C]

Synonym: mhp570

Alternate gene names: 54020250

Gene position: 720537-721316 (Clockwise)

Preceding gene: 54020249

Following gene: 54020251

Centisome position: 80.71

GC content: 23.46

Gene sequence:

>780_bases
ATGAATAGTAATTTAATTGATCAACTTTCATTGTTATTAAAGCAAAATCGGAATTTTATTGATAAAGAAATTGCCGGTTT
TTTGCTTTTAAATATTCAAAAAATAATGTCTTTAAAGTTGGAAATAATTGCCAAAAGTGCAAATTGTTCAACTGCTTCGG
TTATAAAATTTTGTAAAAGACTAGGTTTTAAGGGGCTAAAAGATTTATTACCTGCTTTAGATCGTAATTATTCGTATTTA
AATTTCCAAAAAAAACGTTATTCTGAGAACAAAATTAGTCAAAAAAATCAAATTTTAAGCAAATATCATCTGTTGATAAT
GAATAATCTTGATAAAATTTATAATCTAAACTATAATTCGATGATAAAATTTGTAGAATTATTACAAAAAACACGACATA
TAATGCTTTTTGGGAAAGGTTCAAATTTAGAATCTATCAATATTTTTGCAAATTATTTATCAAAATTGCAATATCATATC
GATTATCATTATGATTTTGAAGTTCAACAAAAATGGACTGAAAAATCAATCGATTCAAGTGTCTGTGTTTTTTTTAGTTT
CTCCGGAATGCATTCAATAATTGATGAATTAGTTAATAAAATGAAAGCAAAAAATTGTATAATTGTCGCTTTTACTGGAA
ATTTTGAAAGTAATTTATATAAGCAATCTTTAATTAGTTTTTTAACTTTTAAAAATGAAGATGTTCTTGAAAATCACACC
TCTGCACGTATTTCTTTTATATATTTAGTAATGCAAATTATTAATTTGCTGAAAAATTAG

Upstream 100 bases:

>100_bases
TCATTTGGCCTAAAAGTGAGCCGAATGCCTGAATTTTAGTTTTAAGCATTTTGAACAAATTAGCCATAAAATATCCTTTT
TCTTGGTATAATTTTTAAAA

Downstream 100 bases:

>100_bases
TCGGTATTTTTATATACCACAATCAATTTTAAGTTTTTAAAACGATAATTTATATTTTTAAAATTAATTTTACAAAAAGT
AATTTTTATTTCTTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNSNLIDQLSLLLKQNRNFIDKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKRLGFKGLKDLLPALDRNYSYL
NFQKKRYSENKISQKNQILSKYHLLIMNNLDKIYNLNYNSMIKFVELLQKTRHIMLFGKGSNLESINIFANYLSKLQYHI
DYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDELVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENHT
SARISFIYLVMQIINLLKN

Sequences:

>Translated_259_residues
MNSNLIDQLSLLLKQNRNFIDKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKRLGFKGLKDLLPALDRNYSYL
NFQKKRYSENKISQKNQILSKYHLLIMNNLDKIYNLNYNSMIKFVELLQKTRHIMLFGKGSNLESINIFANYLSKLQYHI
DYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDELVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENHT
SARISFIYLVMQIINLLKN
>Mature_259_residues
MNSNLIDQLSLLLKQNRNFIDKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKRLGFKGLKDLLPALDRNYSYL
NFQKKRYSENKISQKNQILSKYHLLIMNNLDKIYNLNYNSMIKFVELLQKTRHIMLFGKGSNLESINIFANYLSKLQYHI
DYHYDFEVQQKWTEKSIDSSVCVFFSFSGMHSIIDELVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENHT
SARISFIYLVMQIINLLKN

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30251; Mature: 30251

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNLIDQLSLLLKQNRNFIDKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH
LGFKGLKDLLPALDRNYSYLNFQKKRYSENKISQKNQILSKYHLLIMNNLDKIYNLNYNS
HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
MIKFVELLQKTRHIMLFGKGSNLESINIFANYLSKLQYHIDYHYDFEVQQKWTEKSIDSS
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCC
VCVFFSFSGMHSIIDELVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENHT
EEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCH
SARISFIYLVMQIINLLKN
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSNLIDQLSLLLKQNRNFIDKEIAGFLLLNIQKIMSLKLEIIAKSANCSTASVIKFCKR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH
LGFKGLKDLLPALDRNYSYLNFQKKRYSENKISQKNQILSKYHLLIMNNLDKIYNLNYNS
HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
MIKFVELLQKTRHIMLFGKGSNLESINIFANYLSKLQYHIDYHYDFEVQQKWTEKSIDSS
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCC
VCVFFSFSGMHSIIDELVNKMKAKNCIIVAFTGNFESNLYKQSLISFLTFKNEDVLENHT
EEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCH
SARISFIYLVMQIINLLKN
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA